Gene : Glyma.13G057800 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR11468:SF8 - ALPHA-GLUCAN PHOSPHORYLASE 1 Genomic Order:  578
Name:  ? Glyma.13G057800 Secondary Identifier:  ? PAC:30505723
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7238 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G057800 0.5kb upstream 0.5kb upstream 10482 true Chr13: 15537334-15547815 Glycine max
Glyma.13G057800 0.5kb upstream 0.5kb upstream 500 false Chr13: 15547316-15547815 Glycine max
Glyma.13G057800 0.5kb downstream 0.5kb downstream 10482 true Chr13: 15536834-15547315 Glycine max
Glyma.13G057800 0.5kb downstream 0.5kb downstream 500 false Chr13: 15536834-15537333 Glycine max
Glyma.13G057800 1.0kb upstream 1.0kb upstream 10982 true Chr13: 15537334-15548315 Glycine max
Glyma.13G057800 1.0kb upstream 1.0kb upstream 1000 false Chr13: 15547316-15548315 Glycine max
Glyma.13G057800 1.0kb downstream 1.0kb downstream 10982 true Chr13: 15536334-15547315 Glycine max
Glyma.13G057800 1.0kb downstream 1.0kb downstream 1000 false Chr13: 15536334-15537333 Glycine max
Glyma.13G057800 2.0kb upstream 2.0kb upstream 11982 true Chr13: 15537334-15549315 Glycine max
Glyma.13G057800 2.0kb upstream 2.0kb upstream 2000 false Chr13: 15547316-15549315 Glycine max
Glyma.13G057800 2.0kb downstream 2.0kb downstream 11982 true Chr13: 15535334-15547315 Glycine max
Glyma.13G057800 2.0kb downstream 2.0kb downstream 2000 false Chr13: 15535334-15537333 Glycine max
Glyma.13G057800 5.0kb upstream 5.0kb upstream 14982 true Chr13: 15537334-15552315 Glycine max
Glyma.13G057800 5.0kb upstream 5.0kb upstream 5000 false Chr13: 15547316-15552315 Glycine max
Glyma.13G057800 5.0kb downstream 5.0kb downstream 14982 true Chr13: 15532334-15547315 Glycine max
Glyma.13G057800 5.0kb downstream 5.0kb downstream 5000 false Chr13: 15532334-15537333 Glycine max
Glyma.13G057800 10.0kb upstream 10.0kb upstream 19982 true Chr13: 15537334-15557315 Glycine max
Glyma.13G057800 10.0kb upstream 10.0kb upstream 10000 false Chr13: 15547316-15557315 Glycine max
Glyma.13G057800 10.0kb downstream 10.0kb downstream 19982 true Chr13: 15527334-15547315 Glycine max
Glyma.13G057800 10.0kb downstream 10.0kb downstream 10000 false Chr13: 15527334-15537333 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299436 5265 Fabidae View MSA
124071447 5270 Rosid View MSA
123744201 5271 Pentapetalae View MSA
122788131 5272 Eudicot View MSA
122045780 5273 Angiosperm View MSA
121351120 5274 Embryophyte View MSA
123425744 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.5584 0.0 20.1651   Low
cufflinks 26.4438 0.0 76.7109 High  
cufflinks 5.39359 0.0 14.4647   Low
cufflinks 20.576 0.0 57.9543 High  
cufflinks 25.2086 0.0 72.6269 High  
cufflinks 9.93811 0.0 26.609    
cufflinks 76.7012 0.0 271.069 High High
cufflinks 24.7175 0.0 71.1447 High  
cufflinks 15.4983 0.0 42.4616    
cufflinks 12.705     High High
cufflinks 0.58       Low
cufflinks 7.001        
cufflinks 9.208     High  
cufflinks 12.233     High High
cufflinks 1.507        
cufflinks 4.17        
cufflinks 1.794        
cufflinks 13.27     High High
cufflinks 11.262     High High
cufflinks 3.927        
cufflinks 1.388        
cufflinks 4.226        
cufflinks 4.575        
cufflinks 0.777       Low
cufflinks 3.796        
cufflinks 1.748        

0 Strain