Gene : Glyma.13G058400 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR13169:SF4 - MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 1-RELATED Genomic Order:  584
Name:  ? Glyma.13G058400 Secondary Identifier:  ? PAC:30504609
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G058400 0.5kb upstream 0.5kb upstream 3885 true Chr13: 15584168-15588052 Glycine max
Glyma.13G058400 0.5kb upstream 0.5kb upstream 500 false Chr13: 15584168-15584667 Glycine max
Glyma.13G058400 0.5kb downstream 0.5kb downstream 3885 true Chr13: 15584668-15588552 Glycine max
Glyma.13G058400 0.5kb downstream 0.5kb downstream 500 false Chr13: 15588053-15588552 Glycine max
Glyma.13G058400 1.0kb upstream 1.0kb upstream 4385 true Chr13: 15583668-15588052 Glycine max
Glyma.13G058400 1.0kb upstream 1.0kb upstream 1000 false Chr13: 15583668-15584667 Glycine max
Glyma.13G058400 1.0kb downstream 1.0kb downstream 4385 true Chr13: 15584668-15589052 Glycine max
Glyma.13G058400 1.0kb downstream 1.0kb downstream 1000 false Chr13: 15588053-15589052 Glycine max
Glyma.13G058400 2.0kb upstream 2.0kb upstream 5385 true Chr13: 15582668-15588052 Glycine max
Glyma.13G058400 2.0kb upstream 2.0kb upstream 2000 false Chr13: 15582668-15584667 Glycine max
Glyma.13G058400 2.0kb downstream 2.0kb downstream 5385 true Chr13: 15584668-15590052 Glycine max
Glyma.13G058400 2.0kb downstream 2.0kb downstream 2000 false Chr13: 15588053-15590052 Glycine max
Glyma.13G058400 5.0kb upstream 5.0kb upstream 8385 true Chr13: 15579668-15588052 Glycine max
Glyma.13G058400 5.0kb upstream 5.0kb upstream 5000 false Chr13: 15579668-15584667 Glycine max
Glyma.13G058400 5.0kb downstream 5.0kb downstream 8385 true Chr13: 15584668-15593052 Glycine max
Glyma.13G058400 5.0kb downstream 5.0kb downstream 5000 false Chr13: 15588053-15593052 Glycine max
Glyma.13G058400 10.0kb upstream 10.0kb upstream 13385 true Chr13: 15574668-15588052 Glycine max
Glyma.13G058400 10.0kb upstream 10.0kb upstream 10000 false Chr13: 15574668-15584667 Glycine max
Glyma.13G058400 10.0kb downstream 10.0kb downstream 13385 true Chr13: 15584668-15598052 Glycine max
Glyma.13G058400 10.0kb downstream 10.0kb downstream 10000 false Chr13: 15588053-15598052 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314619 5265 Fabidae View MSA
124063015 5270 Rosid View MSA
123741686 5271 Pentapetalae View MSA
122788977 5272 Eudicot View MSA
122050739 5273 Angiosperm View MSA
121344338 5274 Embryophyte View MSA
123427741 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.4059 0.0 57.3659    
cufflinks 8.08164 0.0 36.3514    
cufflinks 11.7207 0.0 57.0652    
cufflinks 10.2077 0.0 50.627    
cufflinks 21.4388 0.0 94.9914 High  
cufflinks 130.738 0.0 848.462 High High
cufflinks 5.86682 0.0 34.6939   Low
cufflinks 13.1114 0.0 63.9068    
cufflinks 55.9923 0.0 258.255 High High
cufflinks 0.668        
cufflinks 1.811        
cufflinks 0.943        
cufflinks 4.018       High
cufflinks 1.512        
cufflinks 0.805        
cufflinks 0.727        
cufflinks 1.596        
cufflinks 1.203        
cufflinks 0.92        
cufflinks 0.712        
cufflinks 1.647        
cufflinks 0.837        
cufflinks 0.456       Low
cufflinks 2.169       High
cufflinks 0.795        
cufflinks 1.228        

0 Strain