Gene : Glyma.13G058800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31348:SF2 - EID1-LIKE F-BOX PROTEIN 1-RELATED Genomic Order:  588
Name:  ? Glyma.13G058800 Secondary Identifier:  ? PAC:30503012
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G058800 0.5kb upstream 0.5kb upstream 4398 true Chr13: 15616223-15620620 Glycine max
Glyma.13G058800 0.5kb upstream 0.5kb upstream 500 false Chr13: 15620121-15620620 Glycine max
Glyma.13G058800 0.5kb downstream 0.5kb downstream 4398 true Chr13: 15615723-15620120 Glycine max
Glyma.13G058800 0.5kb downstream 0.5kb downstream 500 false Chr13: 15615723-15616222 Glycine max
Glyma.13G058800 1.0kb upstream 1.0kb upstream 4898 true Chr13: 15616223-15621120 Glycine max
Glyma.13G058800 1.0kb upstream 1.0kb upstream 1000 false Chr13: 15620121-15621120 Glycine max
Glyma.13G058800 1.0kb downstream 1.0kb downstream 4898 true Chr13: 15615223-15620120 Glycine max
Glyma.13G058800 1.0kb downstream 1.0kb downstream 1000 false Chr13: 15615223-15616222 Glycine max
Glyma.13G058800 2.0kb upstream 2.0kb upstream 5898 true Chr13: 15616223-15622120 Glycine max
Glyma.13G058800 2.0kb upstream 2.0kb upstream 2000 false Chr13: 15620121-15622120 Glycine max
Glyma.13G058800 2.0kb downstream 2.0kb downstream 5898 true Chr13: 15614223-15620120 Glycine max
Glyma.13G058800 2.0kb downstream 2.0kb downstream 2000 false Chr13: 15614223-15616222 Glycine max
Glyma.13G058800 5.0kb upstream 5.0kb upstream 8898 true Chr13: 15616223-15625120 Glycine max
Glyma.13G058800 5.0kb upstream 5.0kb upstream 5000 false Chr13: 15620121-15625120 Glycine max
Glyma.13G058800 5.0kb downstream 5.0kb downstream 8898 true Chr13: 15611223-15620120 Glycine max
Glyma.13G058800 5.0kb downstream 5.0kb downstream 5000 false Chr13: 15611223-15616222 Glycine max
Glyma.13G058800 10.0kb upstream 10.0kb upstream 13898 true Chr13: 15616223-15630120 Glycine max
Glyma.13G058800 10.0kb upstream 10.0kb upstream 10000 false Chr13: 15620121-15630120 Glycine max
Glyma.13G058800 10.0kb downstream 10.0kb downstream 13898 true Chr13: 15606223-15620120 Glycine max
Glyma.13G058800 10.0kb downstream 10.0kb downstream 10000 false Chr13: 15606223-15616222 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122787901 5272 Eudicot View MSA
122312023 5265 Fabidae View MSA
124066627 5270 Rosid View MSA
123739494 5271 Pentapetalae View MSA
122043886 5273 Angiosperm View MSA
121350489 5274 Embryophyte View MSA
123381754 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.28679 0.0 29.8124    
cufflinks 5.72413 0.0 25.9162    
cufflinks 10.4624 0.0 44.1377   High
cufflinks 6.77173 0.0 28.3057    
cufflinks 5.07084 0.0 22.8878   Low
cufflinks 6.62184 0.0 27.8238    
cufflinks 9.35042 0.0 39.2837   High
cufflinks 7.42435 0.0 29.6055    
cufflinks 7.07355 0.0 29.2335    
cufflinks 1.163        
cufflinks 1.418        
cufflinks 1.455        
cufflinks 0.761        
cufflinks 0.798        
cufflinks 6.816     High High
cufflinks 1.194        
cufflinks 0.559       Low
cufflinks 1.149        
cufflinks 1.393        
cufflinks 1.367        
cufflinks 1.322        
cufflinks 1.071        
cufflinks 0.951        
cufflinks 1.55        
cufflinks 1.11        
cufflinks 0.8        

0 Strain