Gene : Misin12G130000 M. sinensis v7.1

Defline:  (1 of 2) PTHR10742//PTHR10742:SF229 - AMINE OXIDASE // PROTOPORPHYRINOGEN OXIDASE 2, CHLOROPLASTIC/MITOCHONDRIAL Genomic Order:  1300
Name:  ? Misin12G130000 Secondary Identifier:  ? PAC:40503755

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Msinensis CHLOROPHYLL-SYN Miscanthus sinensis pathologic  
Msinensis HEME-BIOSYNTHESIS-II Miscanthus sinensis pathologic  
Msinensis PWY-5918 Miscanthus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Misin12G130000 0.5kb upstream 0.5kb upstream 8785 true Chr12: 56544545-56553329 Miscanthus sinensis
Misin12G130000 0.5kb upstream 0.5kb upstream 500 false Chr12: 56552830-56553329 Miscanthus sinensis
Misin12G130000 0.5kb downstream 0.5kb downstream 8785 true Chr12: 56544045-56552829 Miscanthus sinensis
Misin12G130000 0.5kb downstream 0.5kb downstream 500 false Chr12: 56544045-56544544 Miscanthus sinensis
Misin12G130000 1.0kb upstream 1.0kb upstream 9285 true Chr12: 56544545-56553829 Miscanthus sinensis
Misin12G130000 1.0kb upstream 1.0kb upstream 1000 false Chr12: 56552830-56553829 Miscanthus sinensis
Misin12G130000 1.0kb downstream 1.0kb downstream 9285 true Chr12: 56543545-56552829 Miscanthus sinensis
Misin12G130000 1.0kb downstream 1.0kb downstream 1000 false Chr12: 56543545-56544544 Miscanthus sinensis
Misin12G130000 2.0kb upstream 2.0kb upstream 10285 true Chr12: 56544545-56554829 Miscanthus sinensis
Misin12G130000 2.0kb upstream 2.0kb upstream 2000 false Chr12: 56552830-56554829 Miscanthus sinensis
Misin12G130000 2.0kb downstream 2.0kb downstream 10285 true Chr12: 56542545-56552829 Miscanthus sinensis
Misin12G130000 2.0kb downstream 2.0kb downstream 2000 false Chr12: 56542545-56544544 Miscanthus sinensis
Misin12G130000 5.0kb upstream 5.0kb upstream 13285 true Chr12: 56544545-56557829 Miscanthus sinensis
Misin12G130000 5.0kb upstream 5.0kb upstream 5000 false Chr12: 56552830-56557829 Miscanthus sinensis
Misin12G130000 5.0kb downstream 5.0kb downstream 13285 true Chr12: 56539545-56552829 Miscanthus sinensis
Misin12G130000 5.0kb downstream 5.0kb downstream 5000 false Chr12: 56539545-56544544 Miscanthus sinensis
Misin12G130000 10.0kb upstream 10.0kb upstream 18285 true Chr12: 56544545-56562829 Miscanthus sinensis
Misin12G130000 10.0kb upstream 10.0kb upstream 10000 false Chr12: 56552830-56562829 Miscanthus sinensis
Misin12G130000 10.0kb downstream 10.0kb downstream 18285 true Chr12: 56534545-56552829 Miscanthus sinensis
Misin12G130000 10.0kb downstream 10.0kb downstream 10000 false Chr12: 56534545-56544544 Miscanthus sinensis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175388 5267 Panicoideae View MSA
124571496 5269 Grass View MSA
122041725 5273 Angiosperm View MSA
121347394 5274 Embryophyte View MSA
123424000 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain