Gene : Glyma.13G059400 G. max Wm82.a2.v1
Defline:  (1 of 10) 5.4.99.5 - Chorismate mutase / Hydroxyphenylpyruvate synthase Genomic Order:  594
Name:  ? Glyma.13G059400 Secondary Identifier:  ? PAC:30502810
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Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-3461 Glycine max pathologic  
Gmax PWY-3462 Glycine max pathologic  
Gmax PWY-3481 Glycine max pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G059400 0.5kb upstream 0.5kb upstream 4468 true Chr13: 15682903-15687370 Glycine max
Glyma.13G059400 0.5kb upstream 0.5kb upstream 500 false Chr13: 15682903-15683402 Glycine max
Glyma.13G059400 0.5kb downstream 0.5kb downstream 4468 true Chr13: 15683403-15687870 Glycine max
Glyma.13G059400 0.5kb downstream 0.5kb downstream 500 false Chr13: 15687371-15687870 Glycine max
Glyma.13G059400 1.0kb upstream 1.0kb upstream 4968 true Chr13: 15682403-15687370 Glycine max
Glyma.13G059400 1.0kb upstream 1.0kb upstream 1000 false Chr13: 15682403-15683402 Glycine max
Glyma.13G059400 1.0kb downstream 1.0kb downstream 4968 true Chr13: 15683403-15688370 Glycine max
Glyma.13G059400 1.0kb downstream 1.0kb downstream 1000 false Chr13: 15687371-15688370 Glycine max
Glyma.13G059400 2.0kb upstream 2.0kb upstream 5968 true Chr13: 15681403-15687370 Glycine max
Glyma.13G059400 2.0kb upstream 2.0kb upstream 2000 false Chr13: 15681403-15683402 Glycine max
Glyma.13G059400 2.0kb downstream 2.0kb downstream 5968 true Chr13: 15683403-15689370 Glycine max
Glyma.13G059400 2.0kb downstream 2.0kb downstream 2000 false Chr13: 15687371-15689370 Glycine max
Glyma.13G059400 5.0kb upstream 5.0kb upstream 8968 true Chr13: 15678403-15687370 Glycine max
Glyma.13G059400 5.0kb upstream 5.0kb upstream 5000 false Chr13: 15678403-15683402 Glycine max
Glyma.13G059400 5.0kb downstream 5.0kb downstream 8968 true Chr13: 15683403-15692370 Glycine max
Glyma.13G059400 5.0kb downstream 5.0kb downstream 5000 false Chr13: 15687371-15692370 Glycine max
Glyma.13G059400 10.0kb upstream 10.0kb upstream 13968 true Chr13: 15673403-15687370 Glycine max
Glyma.13G059400 10.0kb upstream 10.0kb upstream 10000 false Chr13: 15673403-15683402 Glycine max
Glyma.13G059400 10.0kb downstream 10.0kb downstream 13968 true Chr13: 15683403-15697370 Glycine max
Glyma.13G059400 10.0kb downstream 10.0kb downstream 10000 false Chr13: 15687371-15697370 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041201 5273 Angiosperm View MSA
122309735 5265 Fabidae View MSA
124071158 5270 Rosid View MSA
123736644 5271 Pentapetalae View MSA
122792454 5272 Eudicot View MSA
121347234 5274 Embryophyte View MSA
123427559 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.6916 0.0 47.5293    
cufflinks 12.5606 0.0 48.2872    
cufflinks 64.5564 0.0 254.061 High High
cufflinks 23.2645 0.0 69.1055 High  
cufflinks 13.206 0.0 49.3878    
cufflinks 101.946 0.0 453.175 High High
cufflinks 21.3882 0.0 64.032    
cufflinks 16.3712 0.0 58.9368    
cufflinks 17.0342 0.0 67.2048    
cufflinks 2.551        
cufflinks 3.653        
cufflinks 6.598       High
cufflinks 3.904        
cufflinks 1.404       Low
cufflinks 5.652     High High
cufflinks 2.334        
cufflinks 3.414        
cufflinks 2.295        
cufflinks 2.713        
cufflinks 1.904       Low
cufflinks 2.998        
cufflinks 2.287        
cufflinks 2.29        
cufflinks 6.312     High High
cufflinks 1.939       Low
cufflinks 3.708        

0 Strain