Gene : Glyma.13G060100 G. max Wm82.a2.v1
Defline:  (1 of 2) PF12204 - Domain of unknown function (DUF3598) (DUF3598) Genomic Order:  601
Name:  ? Glyma.13G060100 Secondary Identifier:  ? PAC:30501619
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G060100 0.5kb upstream 0.5kb upstream 5445 true Chr13: 15743759-15749203 Glycine max
Glyma.13G060100 0.5kb upstream 0.5kb upstream 500 false Chr13: 15743759-15744258 Glycine max
Glyma.13G060100 0.5kb downstream 0.5kb downstream 5445 true Chr13: 15744259-15749703 Glycine max
Glyma.13G060100 0.5kb downstream 0.5kb downstream 500 false Chr13: 15749204-15749703 Glycine max
Glyma.13G060100 1.0kb upstream 1.0kb upstream 5945 true Chr13: 15743259-15749203 Glycine max
Glyma.13G060100 1.0kb upstream 1.0kb upstream 1000 false Chr13: 15743259-15744258 Glycine max
Glyma.13G060100 1.0kb downstream 1.0kb downstream 5945 true Chr13: 15744259-15750203 Glycine max
Glyma.13G060100 1.0kb downstream 1.0kb downstream 1000 false Chr13: 15749204-15750203 Glycine max
Glyma.13G060100 2.0kb upstream 2.0kb upstream 6945 true Chr13: 15742259-15749203 Glycine max
Glyma.13G060100 2.0kb upstream 2.0kb upstream 2000 false Chr13: 15742259-15744258 Glycine max
Glyma.13G060100 2.0kb downstream 2.0kb downstream 6945 true Chr13: 15744259-15751203 Glycine max
Glyma.13G060100 2.0kb downstream 2.0kb downstream 2000 false Chr13: 15749204-15751203 Glycine max
Glyma.13G060100 5.0kb upstream 5.0kb upstream 9945 true Chr13: 15739259-15749203 Glycine max
Glyma.13G060100 5.0kb upstream 5.0kb upstream 5000 false Chr13: 15739259-15744258 Glycine max
Glyma.13G060100 5.0kb downstream 5.0kb downstream 9945 true Chr13: 15744259-15754203 Glycine max
Glyma.13G060100 5.0kb downstream 5.0kb downstream 5000 false Chr13: 15749204-15754203 Glycine max
Glyma.13G060100 10.0kb upstream 10.0kb upstream 14945 true Chr13: 15734259-15749203 Glycine max
Glyma.13G060100 10.0kb upstream 10.0kb upstream 10000 false Chr13: 15734259-15744258 Glycine max
Glyma.13G060100 10.0kb downstream 10.0kb downstream 14945 true Chr13: 15744259-15759203 Glycine max
Glyma.13G060100 10.0kb downstream 10.0kb downstream 10000 false Chr13: 15749204-15759203 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299578 5265 Fabidae View MSA
124065506 5270 Rosid View MSA
123750671 5271 Pentapetalae View MSA
122787095 5272 Eudicot View MSA
122045583 5273 Angiosperm View MSA
121345533 5274 Embryophyte View MSA
123380234 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.6955 0.0 39.7742   High
cufflinks 10.5392 0.0 29.1742   High
cufflinks 6.21581 0.0 18.1876    
cufflinks 5.12964 0.0 15.4426    
cufflinks 2.58633 0.0 8.59332    
cufflinks 1.99992 0.0 6.84511   Low
cufflinks 3.62419 0.0 11.5109    
cufflinks 4.16884 0.0 12.897    
cufflinks 2.72301 0.0 8.9709    
cufflinks 1.409        
cufflinks 0.133       Low
cufflinks 3.453        
cufflinks 0.602        
cufflinks 0.565        
cufflinks 0.497        
cufflinks 8.939     High High
cufflinks 0.288        
cufflinks 3.992        
cufflinks 3.362        
cufflinks 13.091     High High
cufflinks 0.12       Low
cufflinks 10.753     High High
cufflinks 8.776     High High
cufflinks 0.094       Low
cufflinks 10.383     High High
cufflinks 0.222       Low

0 Strain