Gene : Glyma.13G061700 G. max Wm82.a2.v1
Defline:  (1 of 10) KOG1161 - Protein involved in vacuolar polyphosphate accumulation, contains SPX domain Genomic Order:  617
Name:  ? Glyma.13G061700 Secondary Identifier:  ? PAC:30502148
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G061700 0.5kb upstream 0.5kb upstream 3820 true Chr13: 15887905-15891724 Glycine max
Glyma.13G061700 0.5kb upstream 0.5kb upstream 500 false Chr13: 15891225-15891724 Glycine max
Glyma.13G061700 0.5kb downstream 0.5kb downstream 3820 true Chr13: 15887405-15891224 Glycine max
Glyma.13G061700 0.5kb downstream 0.5kb downstream 500 false Chr13: 15887405-15887904 Glycine max
Glyma.13G061700 1.0kb upstream 1.0kb upstream 4320 true Chr13: 15887905-15892224 Glycine max
Glyma.13G061700 1.0kb upstream 1.0kb upstream 1000 false Chr13: 15891225-15892224 Glycine max
Glyma.13G061700 1.0kb downstream 1.0kb downstream 4320 true Chr13: 15886905-15891224 Glycine max
Glyma.13G061700 1.0kb downstream 1.0kb downstream 1000 false Chr13: 15886905-15887904 Glycine max
Glyma.13G061700 2.0kb upstream 2.0kb upstream 5320 true Chr13: 15887905-15893224 Glycine max
Glyma.13G061700 2.0kb upstream 2.0kb upstream 2000 false Chr13: 15891225-15893224 Glycine max
Glyma.13G061700 2.0kb downstream 2.0kb downstream 5320 true Chr13: 15885905-15891224 Glycine max
Glyma.13G061700 2.0kb downstream 2.0kb downstream 2000 false Chr13: 15885905-15887904 Glycine max
Glyma.13G061700 5.0kb upstream 5.0kb upstream 8320 true Chr13: 15887905-15896224 Glycine max
Glyma.13G061700 5.0kb upstream 5.0kb upstream 5000 false Chr13: 15891225-15896224 Glycine max
Glyma.13G061700 5.0kb downstream 5.0kb downstream 8320 true Chr13: 15882905-15891224 Glycine max
Glyma.13G061700 5.0kb downstream 5.0kb downstream 5000 false Chr13: 15882905-15887904 Glycine max
Glyma.13G061700 10.0kb upstream 10.0kb upstream 13320 true Chr13: 15887905-15901224 Glycine max
Glyma.13G061700 10.0kb upstream 10.0kb upstream 10000 false Chr13: 15891225-15901224 Glycine max
Glyma.13G061700 10.0kb downstream 10.0kb downstream 13320 true Chr13: 15877905-15891224 Glycine max
Glyma.13G061700 10.0kb downstream 10.0kb downstream 10000 false Chr13: 15877905-15887904 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041268 5273 Angiosperm View MSA
122300506 5265 Fabidae View MSA
124068235 5270 Rosid View MSA
123744824 5271 Pentapetalae View MSA
122771260 5272 Eudicot View MSA
121351061 5274 Embryophyte View MSA
123427814 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.4107 0.0 44.8994   High
cufflinks 7.45509 0.0 30.5173   Low
cufflinks 11.4726 0.0 42.075   High
cufflinks 9.4037 0.0 35.726    
cufflinks 7.96543 0.0 31.9902   Low
cufflinks 8.88238 0.0 34.3579    
cufflinks 9.69735 0.0 36.7599    
cufflinks 10.7435 0.0 39.6471    
cufflinks 8.66708 0.0 33.5574    
cufflinks 1.563        
cufflinks 1.853        
cufflinks 1.593        
cufflinks 1.392        
cufflinks 1.062       Low
cufflinks 2.512       High
cufflinks 1.543        
cufflinks 1.249       Low
cufflinks 1.654        
cufflinks 1.683        
cufflinks 1.924        
cufflinks 2.485       High
cufflinks 2.273       High
cufflinks 2.075        
cufflinks 2.227       High
cufflinks 1.648        
cufflinks 1.824        

0 Strain