Gene : Glyma.13G063400 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR22939:SF99 - PROTEASE DO-LIKE 8, CHLOROPLASTIC Genomic Order:  634
Name:  ? Glyma.13G063400 Secondary Identifier:  ? PAC:30504448
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G063400 0.5kb upstream 0.5kb upstream 6715 true Chr13: 16188119-16194833 Glycine max
Glyma.13G063400 0.5kb upstream 0.5kb upstream 500 false Chr13: 16194334-16194833 Glycine max
Glyma.13G063400 0.5kb downstream 0.5kb downstream 6715 true Chr13: 16187619-16194333 Glycine max
Glyma.13G063400 0.5kb downstream 0.5kb downstream 500 false Chr13: 16187619-16188118 Glycine max
Glyma.13G063400 1.0kb upstream 1.0kb upstream 7215 true Chr13: 16188119-16195333 Glycine max
Glyma.13G063400 1.0kb upstream 1.0kb upstream 1000 false Chr13: 16194334-16195333 Glycine max
Glyma.13G063400 1.0kb downstream 1.0kb downstream 7215 true Chr13: 16187119-16194333 Glycine max
Glyma.13G063400 1.0kb downstream 1.0kb downstream 1000 false Chr13: 16187119-16188118 Glycine max
Glyma.13G063400 2.0kb upstream 2.0kb upstream 8215 true Chr13: 16188119-16196333 Glycine max
Glyma.13G063400 2.0kb upstream 2.0kb upstream 2000 false Chr13: 16194334-16196333 Glycine max
Glyma.13G063400 2.0kb downstream 2.0kb downstream 8215 true Chr13: 16186119-16194333 Glycine max
Glyma.13G063400 2.0kb downstream 2.0kb downstream 2000 false Chr13: 16186119-16188118 Glycine max
Glyma.13G063400 5.0kb upstream 5.0kb upstream 11215 true Chr13: 16188119-16199333 Glycine max
Glyma.13G063400 5.0kb upstream 5.0kb upstream 5000 false Chr13: 16194334-16199333 Glycine max
Glyma.13G063400 5.0kb downstream 5.0kb downstream 11215 true Chr13: 16183119-16194333 Glycine max
Glyma.13G063400 5.0kb downstream 5.0kb downstream 5000 false Chr13: 16183119-16188118 Glycine max
Glyma.13G063400 10.0kb upstream 10.0kb upstream 16215 true Chr13: 16188119-16204333 Glycine max
Glyma.13G063400 10.0kb upstream 10.0kb upstream 10000 false Chr13: 16194334-16204333 Glycine max
Glyma.13G063400 10.0kb downstream 10.0kb downstream 16215 true Chr13: 16178119-16194333 Glycine max
Glyma.13G063400 10.0kb downstream 10.0kb downstream 10000 false Chr13: 16178119-16188118 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308654 5265 Fabidae View MSA
124061004 5270 Rosid View MSA
123741141 5271 Pentapetalae View MSA
122788612 5272 Eudicot View MSA
122041549 5273 Angiosperm View MSA
121347580 5274 Embryophyte View MSA
123424276 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.58804 0.0 19.2185    
cufflinks 4.97883 0.0 17.5937    
cufflinks 7.20187 0.0 23.1935   High
cufflinks 4.62977 0.0 16.682    
cufflinks 2.48826 0.0 10.9376    
cufflinks 1.05823 0.0 4.60536   Low
cufflinks 5.63538 0.0 19.3883    
cufflinks 3.65641 0.0 14.0894    
cufflinks 2.33245 0.0 10.3943    
cufflinks 0.431        
cufflinks 0.094       Low
cufflinks 1.282        
cufflinks 0.341        
cufflinks 0.444        
cufflinks 0.259        
cufflinks 1.672       High
cufflinks 0.123       Low
cufflinks 1.242        
cufflinks 0.915        
cufflinks 1.969       High
cufflinks 0.141       Low
cufflinks 1.785       High
cufflinks 1.661       High
cufflinks 0.106       Low
cufflinks 1.703       High
cufflinks 0.085       Low

0 Strain