Gene : Glyma.13G050900 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR35705:SF1 - WPP DOMAIN-INTERACTING TAIL-ANCHORED PROTEIN 1 Genomic Order:  509
Name:  ? Glyma.13G050900 Secondary Identifier:  ? PAC:30505916
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Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G050900 0.5kb upstream 0.5kb upstream 5943 true Chr13: 14730756-14736698 Glycine max
Glyma.13G050900 0.5kb upstream 0.5kb upstream 500 false Chr13: 14736199-14736698 Glycine max
Glyma.13G050900 0.5kb downstream 0.5kb downstream 5943 true Chr13: 14730256-14736198 Glycine max
Glyma.13G050900 0.5kb downstream 0.5kb downstream 500 false Chr13: 14730256-14730755 Glycine max
Glyma.13G050900 1.0kb upstream 1.0kb upstream 6443 true Chr13: 14730756-14737198 Glycine max
Glyma.13G050900 1.0kb upstream 1.0kb upstream 1000 false Chr13: 14736199-14737198 Glycine max
Glyma.13G050900 1.0kb downstream 1.0kb downstream 6443 true Chr13: 14729756-14736198 Glycine max
Glyma.13G050900 1.0kb downstream 1.0kb downstream 1000 false Chr13: 14729756-14730755 Glycine max
Glyma.13G050900 2.0kb upstream 2.0kb upstream 7443 true Chr13: 14730756-14738198 Glycine max
Glyma.13G050900 2.0kb upstream 2.0kb upstream 2000 false Chr13: 14736199-14738198 Glycine max
Glyma.13G050900 2.0kb downstream 2.0kb downstream 7443 true Chr13: 14728756-14736198 Glycine max
Glyma.13G050900 2.0kb downstream 2.0kb downstream 2000 false Chr13: 14728756-14730755 Glycine max
Glyma.13G050900 5.0kb upstream 5.0kb upstream 10443 true Chr13: 14730756-14741198 Glycine max
Glyma.13G050900 5.0kb upstream 5.0kb upstream 5000 false Chr13: 14736199-14741198 Glycine max
Glyma.13G050900 5.0kb downstream 5.0kb downstream 10443 true Chr13: 14725756-14736198 Glycine max
Glyma.13G050900 5.0kb downstream 5.0kb downstream 5000 false Chr13: 14725756-14730755 Glycine max
Glyma.13G050900 10.0kb upstream 10.0kb upstream 15443 true Chr13: 14730756-14746198 Glycine max
Glyma.13G050900 10.0kb upstream 10.0kb upstream 10000 false Chr13: 14736199-14746198 Glycine max
Glyma.13G050900 10.0kb downstream 10.0kb downstream 15443 true Chr13: 14720756-14736198 Glycine max
Glyma.13G050900 10.0kb downstream 10.0kb downstream 10000 false Chr13: 14720756-14730755 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314582 5265 Fabidae View MSA
124064704 5270 Rosid View MSA
123737146 5271 Pentapetalae View MSA
122786197 5272 Eudicot View MSA
122042229 5273 Angiosperm View MSA
121309938 5274 Embryophyte View MSA
123347566 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.315828 0.0 1.97452   Low
cufflinks 0.799768 0.0 4.33133    
cufflinks 0.541584 0.0 2.39614   Low
cufflinks 2.30684 0.0 9.13056    
cufflinks 3.39139 0.0 14.0322   High
cufflinks 1.39247 0.0 5.06035    
cufflinks 2.31267 0.0 9.50565    
cufflinks 2.83549 0.0 12.5389    
cufflinks 2.26025 0.0 6.90815    
cufflinks 0.667       High
cufflinks 0.124        
cufflinks 0.18        
cufflinks 0.985       High
cufflinks 1.705       High
cufflinks 0.119        
cufflinks 0.172        
cufflinks 0.136        
cufflinks 0.495        
cufflinks 0.316        
cufflinks 0.181        
cufflinks 0.123        
cufflinks 0.167        
cufflinks 0.239        
cufflinks 0.141        
cufflinks 0.154        
cufflinks 0.089       Low

0 Strain