Gene : Glyma.13G051600 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR24298:SF1 - CYTOCHROME P450, FAMILY 79, SUBFAMILY C, POLYPEPTIDE 1-RELATED Genomic Order:  516
Name:  ? Glyma.13G051600 Secondary Identifier:  ? PAC:30503408
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5990 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G051600 0.5kb upstream 0.5kb upstream 2989 true Chr13: 14805145-14808133 Glycine max
Glyma.13G051600 0.5kb upstream 0.5kb upstream 500 false Chr13: 14805145-14805644 Glycine max
Glyma.13G051600 0.5kb downstream 0.5kb downstream 2989 true Chr13: 14805645-14808633 Glycine max
Glyma.13G051600 0.5kb downstream 0.5kb downstream 500 false Chr13: 14808134-14808633 Glycine max
Glyma.13G051600 1.0kb upstream 1.0kb upstream 3489 true Chr13: 14804645-14808133 Glycine max
Glyma.13G051600 1.0kb upstream 1.0kb upstream 1000 false Chr13: 14804645-14805644 Glycine max
Glyma.13G051600 1.0kb downstream 1.0kb downstream 3489 true Chr13: 14805645-14809133 Glycine max
Glyma.13G051600 1.0kb downstream 1.0kb downstream 1000 false Chr13: 14808134-14809133 Glycine max
Glyma.13G051600 2.0kb upstream 2.0kb upstream 4489 true Chr13: 14803645-14808133 Glycine max
Glyma.13G051600 2.0kb upstream 2.0kb upstream 2000 false Chr13: 14803645-14805644 Glycine max
Glyma.13G051600 2.0kb downstream 2.0kb downstream 4489 true Chr13: 14805645-14810133 Glycine max
Glyma.13G051600 2.0kb downstream 2.0kb downstream 2000 false Chr13: 14808134-14810133 Glycine max
Glyma.13G051600 5.0kb upstream 5.0kb upstream 7489 true Chr13: 14800645-14808133 Glycine max
Glyma.13G051600 5.0kb upstream 5.0kb upstream 5000 false Chr13: 14800645-14805644 Glycine max
Glyma.13G051600 5.0kb downstream 5.0kb downstream 7489 true Chr13: 14805645-14813133 Glycine max
Glyma.13G051600 5.0kb downstream 5.0kb downstream 5000 false Chr13: 14808134-14813133 Glycine max
Glyma.13G051600 10.0kb upstream 10.0kb upstream 12489 true Chr13: 14795645-14808133 Glycine max
Glyma.13G051600 10.0kb upstream 10.0kb upstream 10000 false Chr13: 14795645-14805644 Glycine max
Glyma.13G051600 10.0kb downstream 10.0kb downstream 12489 true Chr13: 14805645-14818133 Glycine max
Glyma.13G051600 10.0kb downstream 10.0kb downstream 10000 false Chr13: 14808134-14818133 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311792 5265 Fabidae View MSA
124074908 5270 Rosid View MSA
123753669 5271 Pentapetalae View MSA
122797866 5272 Eudicot View MSA
122051653 5273 Angiosperm View MSA
123429088 5275 Viridiplantae View MSA
121351760 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.129467 0.0 0.505954 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.470013 0.0 1.73097   High
cufflinks 0.00703383 0.0 0.0332281 Low Low
cufflinks 0.102756 0.0 0.405085 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0737802 0.0 0.294143 Low  
cufflinks 15.418     High  
cufflinks 7.176     High  
cufflinks 3.753        
cufflinks 0.02     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 41.016     High High
cufflinks 0.293        
cufflinks 93.887     High High
cufflinks 2.58        
cufflinks 0.194        
cufflinks 0.149       Low
cufflinks 2.51        
cufflinks 0.14       Low
cufflinks 7.926     High  
cufflinks 9.437     High  
cufflinks 0.39        
cufflinks 20.204     High  

0 Strain