Gene : Glyma.13G054900 G. max Wm82.a2.v1
Genomic Order:  549 Name:  ? Glyma.13G054900
Secondary Identifier:  ? PAC:30503458
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G054900 0.5kb upstream 0.5kb upstream 1050 true Chr13: 15221232-15222281 Glycine max
Glyma.13G054900 0.5kb upstream 0.5kb upstream 500 false Chr13: 15221232-15221731 Glycine max
Glyma.13G054900 0.5kb downstream 0.5kb downstream 1050 true Chr13: 15221732-15222781 Glycine max
Glyma.13G054900 0.5kb downstream 0.5kb downstream 500 false Chr13: 15222282-15222781 Glycine max
Glyma.13G054900 1.0kb upstream 1.0kb upstream 1550 true Chr13: 15220732-15222281 Glycine max
Glyma.13G054900 1.0kb upstream 1.0kb upstream 1000 false Chr13: 15220732-15221731 Glycine max
Glyma.13G054900 1.0kb downstream 1.0kb downstream 1550 true Chr13: 15221732-15223281 Glycine max
Glyma.13G054900 1.0kb downstream 1.0kb downstream 1000 false Chr13: 15222282-15223281 Glycine max
Glyma.13G054900 2.0kb upstream 2.0kb upstream 2550 true Chr13: 15219732-15222281 Glycine max
Glyma.13G054900 2.0kb upstream 2.0kb upstream 2000 false Chr13: 15219732-15221731 Glycine max
Glyma.13G054900 2.0kb downstream 2.0kb downstream 2550 true Chr13: 15221732-15224281 Glycine max
Glyma.13G054900 2.0kb downstream 2.0kb downstream 2000 false Chr13: 15222282-15224281 Glycine max
Glyma.13G054900 5.0kb upstream 5.0kb upstream 5550 true Chr13: 15216732-15222281 Glycine max
Glyma.13G054900 5.0kb upstream 5.0kb upstream 5000 false Chr13: 15216732-15221731 Glycine max
Glyma.13G054900 5.0kb downstream 5.0kb downstream 5550 true Chr13: 15221732-15227281 Glycine max
Glyma.13G054900 5.0kb downstream 5.0kb downstream 5000 false Chr13: 15222282-15227281 Glycine max
Glyma.13G054900 10.0kb upstream 10.0kb upstream 10550 true Chr13: 15211732-15222281 Glycine max
Glyma.13G054900 10.0kb upstream 10.0kb upstream 10000 false Chr13: 15211732-15221731 Glycine max
Glyma.13G054900 10.0kb downstream 10.0kb downstream 10550 true Chr13: 15221732-15232281 Glycine max
Glyma.13G054900 10.0kb downstream 10.0kb downstream 10000 false Chr13: 15222282-15232281 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121672853 5273 Angiosperm View MSA
122297116 5265 Fabidae View MSA
124069625 5270 Rosid View MSA
123627875 5271 Pentapetalae View MSA
122662214 5272 Eudicot View MSA
120944761 5274 Embryophyte View MSA
122985175 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.97779 0.0 10.749    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.38528 0.0 8.72198    
cufflinks 0.675187 0.0 2.61804    
cufflinks 0.403817 0.0 1.59637    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0843947 0.0 0.36348 Low Low
cufflinks 2.42671 0.0 8.86135    
cufflinks 1.10832 0.0 4.20702    
cufflinks 1.084       High
cufflinks 0.575        
cufflinks 1.371       High
cufflinks 0.409        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.032     Low Low
cufflinks 0.312        
cufflinks 0.294        
cufflinks 0.432        
cufflinks 0.077     Low Low
cufflinks 0.346        
cufflinks 0.351        
cufflinks 0.594        
cufflinks 0.288        
cufflinks 1.258       High
cufflinks 0.243        
cufflinks 0.288        

0 Strain