Gene : Glyma.13G100200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR22957:SF28 - TBC1 DOMAIN FAMILY MEMBER 5 Genomic Order:  1002
Name:  ? Glyma.13G100200 Secondary Identifier:  ? PAC:30505859
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G100200 0.5kb upstream 0.5kb upstream 8829 true Chr13: 21557126-21565954 Glycine max
Glyma.13G100200 0.5kb upstream 0.5kb upstream 500 false Chr13: 21557126-21557625 Glycine max
Glyma.13G100200 0.5kb downstream 0.5kb downstream 8829 true Chr13: 21557626-21566454 Glycine max
Glyma.13G100200 0.5kb downstream 0.5kb downstream 500 false Chr13: 21565955-21566454 Glycine max
Glyma.13G100200 1.0kb upstream 1.0kb upstream 9329 true Chr13: 21556626-21565954 Glycine max
Glyma.13G100200 1.0kb upstream 1.0kb upstream 1000 false Chr13: 21556626-21557625 Glycine max
Glyma.13G100200 1.0kb downstream 1.0kb downstream 9329 true Chr13: 21557626-21566954 Glycine max
Glyma.13G100200 1.0kb downstream 1.0kb downstream 1000 false Chr13: 21565955-21566954 Glycine max
Glyma.13G100200 2.0kb upstream 2.0kb upstream 10329 true Chr13: 21555626-21565954 Glycine max
Glyma.13G100200 2.0kb upstream 2.0kb upstream 2000 false Chr13: 21555626-21557625 Glycine max
Glyma.13G100200 2.0kb downstream 2.0kb downstream 10329 true Chr13: 21557626-21567954 Glycine max
Glyma.13G100200 2.0kb downstream 2.0kb downstream 2000 false Chr13: 21565955-21567954 Glycine max
Glyma.13G100200 5.0kb upstream 5.0kb upstream 13329 true Chr13: 21552626-21565954 Glycine max
Glyma.13G100200 5.0kb upstream 5.0kb upstream 5000 false Chr13: 21552626-21557625 Glycine max
Glyma.13G100200 5.0kb downstream 5.0kb downstream 13329 true Chr13: 21557626-21570954 Glycine max
Glyma.13G100200 5.0kb downstream 5.0kb downstream 5000 false Chr13: 21565955-21570954 Glycine max
Glyma.13G100200 10.0kb upstream 10.0kb upstream 18329 true Chr13: 21547626-21565954 Glycine max
Glyma.13G100200 10.0kb upstream 10.0kb upstream 10000 false Chr13: 21547626-21557625 Glycine max
Glyma.13G100200 10.0kb downstream 10.0kb downstream 18329 true Chr13: 21557626-21575954 Glycine max
Glyma.13G100200 10.0kb downstream 10.0kb downstream 10000 false Chr13: 21565955-21575954 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314968 5265 Fabidae View MSA
124063811 5270 Rosid View MSA
123743864 5271 Pentapetalae View MSA
122788044 5272 Eudicot View MSA
122042280 5273 Angiosperm View MSA
121350721 5274 Embryophyte View MSA
123428432 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.33961 0.0 32.9398    
cufflinks 7.50343 0.0 29.9611    
cufflinks 18.5137 0.0 91.3275   High
cufflinks 5.57726 0.0 26.7549    
cufflinks 7.41017 0.0 29.3344    
cufflinks 6.80926 0.0 26.7789    
cufflinks 4.84471 0.0 22.8082   Low
cufflinks 8.48559 0.0 36.7621    
cufflinks 6.34941 0.0 27.819    
cufflinks 0.516        
cufflinks 0.324       Low
cufflinks 1.105       High
cufflinks 0.452        
cufflinks 0.389        
cufflinks 0.354        
cufflinks 0.769        
cufflinks 0.282       Low
cufflinks 1.179       High
cufflinks 0.73        
cufflinks 0.846        
cufflinks 0.294       Low
cufflinks 0.888        
cufflinks 0.795        
cufflinks 0.339        
cufflinks 0.741        
cufflinks 0.31       Low

0 Strain