Gene : Glyma.13G101600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR23216 - NUCLEOLAR AND COILED-BODY PHOSPHOPROTEIN 1 Genomic Order:  1016
Name:  ? Glyma.13G101600 Secondary Identifier:  ? PAC:30501751
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G101600 0.5kb upstream 0.5kb upstream 4967 true Chr13: 21676725-21681691 Glycine max
Glyma.13G101600 0.5kb upstream 0.5kb upstream 500 false Chr13: 21676725-21677224 Glycine max
Glyma.13G101600 0.5kb downstream 0.5kb downstream 4967 true Chr13: 21677225-21682191 Glycine max
Glyma.13G101600 0.5kb downstream 0.5kb downstream 500 false Chr13: 21681692-21682191 Glycine max
Glyma.13G101600 1.0kb upstream 1.0kb upstream 5467 true Chr13: 21676225-21681691 Glycine max
Glyma.13G101600 1.0kb upstream 1.0kb upstream 1000 false Chr13: 21676225-21677224 Glycine max
Glyma.13G101600 1.0kb downstream 1.0kb downstream 5467 true Chr13: 21677225-21682691 Glycine max
Glyma.13G101600 1.0kb downstream 1.0kb downstream 1000 false Chr13: 21681692-21682691 Glycine max
Glyma.13G101600 2.0kb upstream 2.0kb upstream 6467 true Chr13: 21675225-21681691 Glycine max
Glyma.13G101600 2.0kb upstream 2.0kb upstream 2000 false Chr13: 21675225-21677224 Glycine max
Glyma.13G101600 2.0kb downstream 2.0kb downstream 6467 true Chr13: 21677225-21683691 Glycine max
Glyma.13G101600 2.0kb downstream 2.0kb downstream 2000 false Chr13: 21681692-21683691 Glycine max
Glyma.13G101600 5.0kb upstream 5.0kb upstream 9467 true Chr13: 21672225-21681691 Glycine max
Glyma.13G101600 5.0kb upstream 5.0kb upstream 5000 false Chr13: 21672225-21677224 Glycine max
Glyma.13G101600 5.0kb downstream 5.0kb downstream 9467 true Chr13: 21677225-21686691 Glycine max
Glyma.13G101600 5.0kb downstream 5.0kb downstream 5000 false Chr13: 21681692-21686691 Glycine max
Glyma.13G101600 10.0kb upstream 10.0kb upstream 14467 true Chr13: 21667225-21681691 Glycine max
Glyma.13G101600 10.0kb upstream 10.0kb upstream 10000 false Chr13: 21667225-21677224 Glycine max
Glyma.13G101600 10.0kb downstream 10.0kb downstream 14467 true Chr13: 21677225-21691691 Glycine max
Glyma.13G101600 10.0kb downstream 10.0kb downstream 10000 false Chr13: 21681692-21691691 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304301 5265 Fabidae View MSA
124071277 5270 Rosid View MSA
123738497 5271 Pentapetalae View MSA
122794212 5272 Eudicot View MSA
122048501 5273 Angiosperm View MSA
121348991 5274 Embryophyte View MSA
123425594 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.4948 0.0 77.9318 High  
cufflinks 17.9907 0.0 61.5587    
cufflinks 6.21425 0.0 23.3966   Low
cufflinks 25.9657 0.0 91.5292 High  
cufflinks 21.9902 0.0 75.9453 High  
cufflinks 15.1521 0.0 51.7637    
cufflinks 20.1682 0.0 69.2316    
cufflinks 13.0273 0.0 44.7319    
cufflinks 29.7631 0.0 106.412 High High
cufflinks 2.419        
cufflinks 1.823       Low
cufflinks 3.977        
cufflinks 6.683       High
cufflinks 8.979     High High
cufflinks 7.204     High High
cufflinks 3.685        
cufflinks 2.203       Low
cufflinks 5.28        
cufflinks 3.576        
cufflinks 3.366        
cufflinks 2.732        
cufflinks 3.138        
cufflinks 3.999        
cufflinks 2.128       Low
cufflinks 3.646        
cufflinks 2.5        

0 Strain