Gene : Glyma.13G103200 G. max Wm82.a2.v1
Defline:  (1 of 1) KOG3911 - Nucleolar protein NOP52/RRP1 Genomic Order:  1032
Name:  ? Glyma.13G103200 Secondary Identifier:  ? PAC:30502610
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G103200 0.5kb upstream 0.5kb upstream 3681 true Chr13: 21822387-21826067 Glycine max
Glyma.13G103200 0.5kb upstream 0.5kb upstream 500 false Chr13: 21825568-21826067 Glycine max
Glyma.13G103200 0.5kb downstream 0.5kb downstream 3681 true Chr13: 21821887-21825567 Glycine max
Glyma.13G103200 0.5kb downstream 0.5kb downstream 500 false Chr13: 21821887-21822386 Glycine max
Glyma.13G103200 1.0kb upstream 1.0kb upstream 4181 true Chr13: 21822387-21826567 Glycine max
Glyma.13G103200 1.0kb upstream 1.0kb upstream 1000 false Chr13: 21825568-21826567 Glycine max
Glyma.13G103200 1.0kb downstream 1.0kb downstream 4181 true Chr13: 21821387-21825567 Glycine max
Glyma.13G103200 1.0kb downstream 1.0kb downstream 1000 false Chr13: 21821387-21822386 Glycine max
Glyma.13G103200 2.0kb upstream 2.0kb upstream 5181 true Chr13: 21822387-21827567 Glycine max
Glyma.13G103200 2.0kb upstream 2.0kb upstream 2000 false Chr13: 21825568-21827567 Glycine max
Glyma.13G103200 2.0kb downstream 2.0kb downstream 5181 true Chr13: 21820387-21825567 Glycine max
Glyma.13G103200 2.0kb downstream 2.0kb downstream 2000 false Chr13: 21820387-21822386 Glycine max
Glyma.13G103200 5.0kb upstream 5.0kb upstream 8181 true Chr13: 21822387-21830567 Glycine max
Glyma.13G103200 5.0kb upstream 5.0kb upstream 5000 false Chr13: 21825568-21830567 Glycine max
Glyma.13G103200 5.0kb downstream 5.0kb downstream 8181 true Chr13: 21817387-21825567 Glycine max
Glyma.13G103200 5.0kb downstream 5.0kb downstream 5000 false Chr13: 21817387-21822386 Glycine max
Glyma.13G103200 10.0kb upstream 10.0kb upstream 13181 true Chr13: 21822387-21835567 Glycine max
Glyma.13G103200 10.0kb upstream 10.0kb upstream 10000 false Chr13: 21825568-21835567 Glycine max
Glyma.13G103200 10.0kb downstream 10.0kb downstream 13181 true Chr13: 21812387-21825567 Glycine max
Glyma.13G103200 10.0kb downstream 10.0kb downstream 10000 false Chr13: 21812387-21822386 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041241 5273 Angiosperm View MSA
122314635 5265 Fabidae View MSA
124064364 5270 Rosid View MSA
123737116 5271 Pentapetalae View MSA
122788031 5272 Eudicot View MSA
121344172 5274 Embryophyte View MSA
123424078 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.58267 0.0 30.5334    
cufflinks 16.4893 0.0 57.0214    
cufflinks 6.70764 0.0 21.8476   Low
cufflinks 10.6633 0.0 40.6221    
cufflinks 16.9366 0.0 59.4673   High
cufflinks 9.65331 0.0 31.6708    
cufflinks 17.8965 0.0 64.5862   High
cufflinks 12.3329 0.0 44.4425    
cufflinks 12.3732 0.0 42.8386    
cufflinks 3.688        
cufflinks 1.966       Low
cufflinks 3.426        
cufflinks 5.678       High
cufflinks 8.4     High High
cufflinks 1.939       Low
cufflinks 4.695        
cufflinks 4.385        
cufflinks 3.775        
cufflinks 5.863       High
cufflinks 4.23        
cufflinks 2.292       Low
cufflinks 4.306        
cufflinks 4.527        
cufflinks 2.341       Low
cufflinks 4.374        
cufflinks 2.959        

0 Strain