Gene : Glyma.13G104000 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR23421:SF74 - BETA-GALACTOSIDASE 1 Genomic Order:  1040
Name:  ? Glyma.13G104000 Secondary Identifier:  ? PAC:30504453
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G104000 0.5kb upstream 0.5kb upstream 6298 true Chr13: 21869688-21875985 Glycine max
Glyma.13G104000 0.5kb upstream 0.5kb upstream 500 false Chr13: 21869688-21870187 Glycine max
Glyma.13G104000 0.5kb downstream 0.5kb downstream 6298 true Chr13: 21870188-21876485 Glycine max
Glyma.13G104000 0.5kb downstream 0.5kb downstream 500 false Chr13: 21875986-21876485 Glycine max
Glyma.13G104000 1.0kb upstream 1.0kb upstream 6798 true Chr13: 21869188-21875985 Glycine max
Glyma.13G104000 1.0kb upstream 1.0kb upstream 1000 false Chr13: 21869188-21870187 Glycine max
Glyma.13G104000 1.0kb downstream 1.0kb downstream 6798 true Chr13: 21870188-21876985 Glycine max
Glyma.13G104000 1.0kb downstream 1.0kb downstream 1000 false Chr13: 21875986-21876985 Glycine max
Glyma.13G104000 2.0kb upstream 2.0kb upstream 7798 true Chr13: 21868188-21875985 Glycine max
Glyma.13G104000 2.0kb upstream 2.0kb upstream 2000 false Chr13: 21868188-21870187 Glycine max
Glyma.13G104000 2.0kb downstream 2.0kb downstream 7798 true Chr13: 21870188-21877985 Glycine max
Glyma.13G104000 2.0kb downstream 2.0kb downstream 2000 false Chr13: 21875986-21877985 Glycine max
Glyma.13G104000 5.0kb upstream 5.0kb upstream 10798 true Chr13: 21865188-21875985 Glycine max
Glyma.13G104000 5.0kb upstream 5.0kb upstream 5000 false Chr13: 21865188-21870187 Glycine max
Glyma.13G104000 5.0kb downstream 5.0kb downstream 10798 true Chr13: 21870188-21880985 Glycine max
Glyma.13G104000 5.0kb downstream 5.0kb downstream 5000 false Chr13: 21875986-21880985 Glycine max
Glyma.13G104000 10.0kb upstream 10.0kb upstream 15798 true Chr13: 21860188-21875985 Glycine max
Glyma.13G104000 10.0kb upstream 10.0kb upstream 10000 false Chr13: 21860188-21870187 Glycine max
Glyma.13G104000 10.0kb downstream 10.0kb downstream 15798 true Chr13: 21870188-21885985 Glycine max
Glyma.13G104000 10.0kb downstream 10.0kb downstream 10000 false Chr13: 21875986-21885985 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313819 5265 Fabidae View MSA
124070593 5270 Rosid View MSA
123743472 5271 Pentapetalae View MSA
122770672 5272 Eudicot View MSA
122049621 5273 Angiosperm View MSA
121350261 5274 Embryophyte View MSA
123428653 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.7624 0.0 14.7153    
cufflinks 0.933096 0.0 3.50628   Low
cufflinks 2.60051 0.0 9.27251    
cufflinks 37.4735 0.0 164.719 High High
cufflinks 1.81603 0.0 7.47703    
cufflinks 5.04999 0.0 15.7307    
cufflinks 45.7224 0.0 183.959 High High
cufflinks 2.82795 0.0 9.96724    
cufflinks 4.05214 0.0 13.1619    
cufflinks 4.457       High
cufflinks 1.026        
cufflinks 0.626       Low
cufflinks 2.69        
cufflinks 1.275        
cufflinks 0.695       Low
cufflinks 5.168       High
cufflinks 1.306        
cufflinks 0.833        
cufflinks 0.598       Low
cufflinks 4.061       High
cufflinks 1.312        
cufflinks 3.341        
cufflinks 1.471        
cufflinks 0.865        
cufflinks 3.83       High
cufflinks 2.923        

0 Strain