Gene : Glyma.13G093000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12818:SF0 - NEF-ASSOCIATED PROTEIN 1 Genomic Order:  930
Name:  ? Glyma.13G093000 Secondary Identifier:  ? PAC:30500651
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G093000 0.5kb upstream 0.5kb upstream 4981 true Chr13: 20795113-20800093 Glycine max
Glyma.13G093000 0.5kb upstream 0.5kb upstream 500 false Chr13: 20795113-20795612 Glycine max
Glyma.13G093000 0.5kb downstream 0.5kb downstream 4981 true Chr13: 20795613-20800593 Glycine max
Glyma.13G093000 0.5kb downstream 0.5kb downstream 500 false Chr13: 20800094-20800593 Glycine max
Glyma.13G093000 1.0kb upstream 1.0kb upstream 5481 true Chr13: 20794613-20800093 Glycine max
Glyma.13G093000 1.0kb upstream 1.0kb upstream 1000 false Chr13: 20794613-20795612 Glycine max
Glyma.13G093000 1.0kb downstream 1.0kb downstream 5481 true Chr13: 20795613-20801093 Glycine max
Glyma.13G093000 1.0kb downstream 1.0kb downstream 1000 false Chr13: 20800094-20801093 Glycine max
Glyma.13G093000 2.0kb upstream 2.0kb upstream 6481 true Chr13: 20793613-20800093 Glycine max
Glyma.13G093000 2.0kb upstream 2.0kb upstream 2000 false Chr13: 20793613-20795612 Glycine max
Glyma.13G093000 2.0kb downstream 2.0kb downstream 6481 true Chr13: 20795613-20802093 Glycine max
Glyma.13G093000 2.0kb downstream 2.0kb downstream 2000 false Chr13: 20800094-20802093 Glycine max
Glyma.13G093000 5.0kb upstream 5.0kb upstream 9481 true Chr13: 20790613-20800093 Glycine max
Glyma.13G093000 5.0kb upstream 5.0kb upstream 5000 false Chr13: 20790613-20795612 Glycine max
Glyma.13G093000 5.0kb downstream 5.0kb downstream 9481 true Chr13: 20795613-20805093 Glycine max
Glyma.13G093000 5.0kb downstream 5.0kb downstream 5000 false Chr13: 20800094-20805093 Glycine max
Glyma.13G093000 10.0kb upstream 10.0kb upstream 14481 true Chr13: 20785613-20800093 Glycine max
Glyma.13G093000 10.0kb upstream 10.0kb upstream 10000 false Chr13: 20785613-20795612 Glycine max
Glyma.13G093000 10.0kb downstream 10.0kb downstream 14481 true Chr13: 20795613-20810093 Glycine max
Glyma.13G093000 10.0kb downstream 10.0kb downstream 10000 false Chr13: 20800094-20810093 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305602 5265 Fabidae View MSA
124061130 5270 Rosid View MSA
123737004 5271 Pentapetalae View MSA
122788525 5272 Eudicot View MSA
122041749 5273 Angiosperm View MSA
121344113 5274 Embryophyte View MSA
123423900 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.80107 0.0 23.4234    
cufflinks 6.64677 0.0 24.7051   High
cufflinks 5.31252 0.0 24.1478    
cufflinks 5.36916 0.0 24.4659    
cufflinks 3.981 0.0 19.6211    
cufflinks 2.75982 0.0 12.0236   Low
cufflinks 5.52059 0.0 19.2828    
cufflinks 3.76661 0.0 18.2657    
cufflinks 4.84621 0.0 21.8058    
cufflinks 0.574        
cufflinks 0.153       Low
cufflinks 1.107        
cufflinks 0.677        
cufflinks 0.819        
cufflinks 0.368        
cufflinks 1.058        
cufflinks 0.298        
cufflinks 1.396       High
cufflinks 1.315       High
cufflinks 1.039        
cufflinks 0.234       Low
cufflinks 1.064        
cufflinks 1.417       High
cufflinks 0.204       Low
cufflinks 1.014        
cufflinks 0.317        

0 Strain