Gene : Glyma.13G093500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR33228:SF5 - PROTEIN GLUTAMINE DUMPER 1-RELATED Genomic Order:  935
Name:  ? Glyma.13G093500 Secondary Identifier:  ? PAC:30504031
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G093500 0.5kb upstream 0.5kb upstream 2546 true Chr13: 20871560-20874105 Glycine max
Glyma.13G093500 0.5kb upstream 0.5kb upstream 500 false Chr13: 20871560-20872059 Glycine max
Glyma.13G093500 0.5kb downstream 0.5kb downstream 2546 true Chr13: 20872060-20874605 Glycine max
Glyma.13G093500 0.5kb downstream 0.5kb downstream 500 false Chr13: 20874106-20874605 Glycine max
Glyma.13G093500 1.0kb upstream 1.0kb upstream 3046 true Chr13: 20871060-20874105 Glycine max
Glyma.13G093500 1.0kb upstream 1.0kb upstream 1000 false Chr13: 20871060-20872059 Glycine max
Glyma.13G093500 1.0kb downstream 1.0kb downstream 3046 true Chr13: 20872060-20875105 Glycine max
Glyma.13G093500 1.0kb downstream 1.0kb downstream 1000 false Chr13: 20874106-20875105 Glycine max
Glyma.13G093500 2.0kb upstream 2.0kb upstream 4046 true Chr13: 20870060-20874105 Glycine max
Glyma.13G093500 2.0kb upstream 2.0kb upstream 2000 false Chr13: 20870060-20872059 Glycine max
Glyma.13G093500 2.0kb downstream 2.0kb downstream 4046 true Chr13: 20872060-20876105 Glycine max
Glyma.13G093500 2.0kb downstream 2.0kb downstream 2000 false Chr13: 20874106-20876105 Glycine max
Glyma.13G093500 5.0kb upstream 5.0kb upstream 7046 true Chr13: 20867060-20874105 Glycine max
Glyma.13G093500 5.0kb upstream 5.0kb upstream 5000 false Chr13: 20867060-20872059 Glycine max
Glyma.13G093500 5.0kb downstream 5.0kb downstream 7046 true Chr13: 20872060-20879105 Glycine max
Glyma.13G093500 5.0kb downstream 5.0kb downstream 5000 false Chr13: 20874106-20879105 Glycine max
Glyma.13G093500 10.0kb upstream 10.0kb upstream 12046 true Chr13: 20862060-20874105 Glycine max
Glyma.13G093500 10.0kb upstream 10.0kb upstream 10000 false Chr13: 20862060-20872059 Glycine max
Glyma.13G093500 10.0kb downstream 10.0kb downstream 12046 true Chr13: 20872060-20884105 Glycine max
Glyma.13G093500 10.0kb downstream 10.0kb downstream 10000 false Chr13: 20874106-20884105 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302313 5265 Fabidae View MSA
124063553 5270 Rosid View MSA
123752792 5271 Pentapetalae View MSA
122796809 5272 Eudicot View MSA
122048439 5273 Angiosperm View MSA
121310974 5274 Embryophyte View MSA
123348338 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.06541 0.0 6.78463   Low
cufflinks 5.07774 0.0 14.7567    
cufflinks 47.174 0.0 131.86 High High
cufflinks 8.4513 0.0 23.2455    
cufflinks 13.5951 0.0 36.4321    
cufflinks 1.38565 0.0 4.76577   Low
cufflinks 18.5875 0.0 49.5892    
cufflinks 10.759 0.0 29.1461    
cufflinks 12.6425 0.0 33.9811    
cufflinks 3.524        
cufflinks 10.803     High High
cufflinks 12.908     High High
cufflinks 1.317        
cufflinks 1.214       Low
cufflinks 6.482     High  
cufflinks 2.29        
cufflinks 1.774        
cufflinks 1.558        
cufflinks 1.558        
cufflinks 2.148        
cufflinks 15.207     High High
cufflinks 2.133        
cufflinks 0.939       Low
cufflinks 17.609     High High
cufflinks 3.267        
cufflinks 5.731        

0 Strain