Gene : Glyma.13G097100 G. max Wm82.a2.v1
Defline:  (1 of 12) 4.1.1.39 - Ribulose-bisphosphate carboxylase / RuBP carboxylase Genomic Order:  971
Name:  ? Glyma.13G097100 Secondary Identifier:  ? PAC:30504082
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax CALVIN-PWY Glycine max pathologic  
Gmax PHOTOALL-PWY Glycine max pathologic  
Gmax PWY-5723 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G097100 0.5kb upstream 0.5kb upstream 2192 true Chr13: 21233449-21235640 Glycine max
Glyma.13G097100 0.5kb upstream 0.5kb upstream 500 false Chr13: 21233449-21233948 Glycine max
Glyma.13G097100 0.5kb downstream 0.5kb downstream 2192 true Chr13: 21233949-21236140 Glycine max
Glyma.13G097100 0.5kb downstream 0.5kb downstream 500 false Chr13: 21235641-21236140 Glycine max
Glyma.13G097100 1.0kb upstream 1.0kb upstream 2692 true Chr13: 21232949-21235640 Glycine max
Glyma.13G097100 1.0kb upstream 1.0kb upstream 1000 false Chr13: 21232949-21233948 Glycine max
Glyma.13G097100 1.0kb downstream 1.0kb downstream 2692 true Chr13: 21233949-21236640 Glycine max
Glyma.13G097100 1.0kb downstream 1.0kb downstream 1000 false Chr13: 21235641-21236640 Glycine max
Glyma.13G097100 2.0kb upstream 2.0kb upstream 3692 true Chr13: 21231949-21235640 Glycine max
Glyma.13G097100 2.0kb upstream 2.0kb upstream 2000 false Chr13: 21231949-21233948 Glycine max
Glyma.13G097100 2.0kb downstream 2.0kb downstream 3692 true Chr13: 21233949-21237640 Glycine max
Glyma.13G097100 2.0kb downstream 2.0kb downstream 2000 false Chr13: 21235641-21237640 Glycine max
Glyma.13G097100 5.0kb upstream 5.0kb upstream 6692 true Chr13: 21228949-21235640 Glycine max
Glyma.13G097100 5.0kb upstream 5.0kb upstream 5000 false Chr13: 21228949-21233948 Glycine max
Glyma.13G097100 5.0kb downstream 5.0kb downstream 6692 true Chr13: 21233949-21240640 Glycine max
Glyma.13G097100 5.0kb downstream 5.0kb downstream 5000 false Chr13: 21235641-21240640 Glycine max
Glyma.13G097100 10.0kb upstream 10.0kb upstream 11692 true Chr13: 21223949-21235640 Glycine max
Glyma.13G097100 10.0kb upstream 10.0kb upstream 10000 false Chr13: 21223949-21233948 Glycine max
Glyma.13G097100 10.0kb downstream 10.0kb downstream 11692 true Chr13: 21233949-21245640 Glycine max
Glyma.13G097100 10.0kb downstream 10.0kb downstream 10000 false Chr13: 21235641-21245640 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310075 5265 Fabidae View MSA
124070505 5270 Rosid View MSA
123742387 5271 Pentapetalae View MSA
122795056 5272 Eudicot View MSA
122048264 5273 Angiosperm View MSA
121348432 5274 Embryophyte View MSA
123426346 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.52403 0.0 8.84539    
cufflinks 0.158533 0.0 0.635377 Low Low
cufflinks 4.34335 0.0 14.2519    
cufflinks 4.06713 0.0 13.5089    
cufflinks 69.4753 0.0 188.139 High High
cufflinks 40.4591 0.0 107.94 High  
cufflinks 1.5043 0.0 5.47022    
cufflinks 10.7464 0.0 31.2052    
cufflinks 99.0491 0.0 276.481 High High
cufflinks 0.347        
cufflinks 166.225     High High
cufflinks 1.609        
cufflinks 76.087     High  
cufflinks 86.816     High  
cufflinks 253.132     High High
cufflinks 0.472        
cufflinks 32.597     High  
cufflinks 0.253       Low
cufflinks 0.062     Low Low
cufflinks 0.957        
cufflinks 259.815     High High
cufflinks 0.739        
cufflinks 0.616        
cufflinks 149.07     High High
cufflinks 0.605        
cufflinks 100.514     High  

0 Strain