Gene : Glyma.13G086300 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR21385:SF1 - C2H2-LIKE ZINC FINGER PROTEIN Genomic Order:  863
Name:  ? Glyma.13G086300 Secondary Identifier:  ? PAC:30500953
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G086300 0.5kb upstream 0.5kb upstream 5532 true Chr13: 19842401-19847932 Glycine max
Glyma.13G086300 0.5kb upstream 0.5kb upstream 500 false Chr13: 19842401-19842900 Glycine max
Glyma.13G086300 0.5kb downstream 0.5kb downstream 5532 true Chr13: 19842901-19848432 Glycine max
Glyma.13G086300 0.5kb downstream 0.5kb downstream 500 false Chr13: 19847933-19848432 Glycine max
Glyma.13G086300 1.0kb upstream 1.0kb upstream 6032 true Chr13: 19841901-19847932 Glycine max
Glyma.13G086300 1.0kb upstream 1.0kb upstream 1000 false Chr13: 19841901-19842900 Glycine max
Glyma.13G086300 1.0kb downstream 1.0kb downstream 6032 true Chr13: 19842901-19848932 Glycine max
Glyma.13G086300 1.0kb downstream 1.0kb downstream 1000 false Chr13: 19847933-19848932 Glycine max
Glyma.13G086300 2.0kb upstream 2.0kb upstream 7032 true Chr13: 19840901-19847932 Glycine max
Glyma.13G086300 2.0kb upstream 2.0kb upstream 2000 false Chr13: 19840901-19842900 Glycine max
Glyma.13G086300 2.0kb downstream 2.0kb downstream 7032 true Chr13: 19842901-19849932 Glycine max
Glyma.13G086300 2.0kb downstream 2.0kb downstream 2000 false Chr13: 19847933-19849932 Glycine max
Glyma.13G086300 5.0kb upstream 5.0kb upstream 10032 true Chr13: 19837901-19847932 Glycine max
Glyma.13G086300 5.0kb upstream 5.0kb upstream 5000 false Chr13: 19837901-19842900 Glycine max
Glyma.13G086300 5.0kb downstream 5.0kb downstream 10032 true Chr13: 19842901-19852932 Glycine max
Glyma.13G086300 5.0kb downstream 5.0kb downstream 5000 false Chr13: 19847933-19852932 Glycine max
Glyma.13G086300 10.0kb upstream 10.0kb upstream 15032 true Chr13: 19832901-19847932 Glycine max
Glyma.13G086300 10.0kb upstream 10.0kb upstream 10000 false Chr13: 19832901-19842900 Glycine max
Glyma.13G086300 10.0kb downstream 10.0kb downstream 15032 true Chr13: 19842901-19857932 Glycine max
Glyma.13G086300 10.0kb downstream 10.0kb downstream 10000 false Chr13: 19847933-19857932 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299293 5265 Fabidae View MSA
124069556 5270 Rosid View MSA
123738749 5271 Pentapetalae View MSA
122792091 5272 Eudicot View MSA
122042462 5273 Angiosperm View MSA
121347105 5274 Embryophyte View MSA
123424913 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.64413 0.0 22.2243    
cufflinks 4.10077 0.0 20.6127    
cufflinks 6.25955 0.0 31.3184    
cufflinks 4.51855 0.0 21.3665    
cufflinks 3.88452 0.0 19.936    
cufflinks 10.6104 0.0 43.5479   High
cufflinks 4.46467 0.0 21.6427    
cufflinks 4.41962 0.0 21.6124    
cufflinks 3.49749 0.0 18.4708    
cufflinks 0.18        
cufflinks 0.152        
cufflinks 0.383       High
cufflinks 0.274        
cufflinks 0.281        
cufflinks 0.171        
cufflinks 0.149        
cufflinks 0.114       Low
cufflinks 0.334       High
cufflinks 0.395       High
cufflinks 0.169        
cufflinks 0.14        
cufflinks 0.186        
cufflinks 0.2        
cufflinks 0.218        
cufflinks 0.142        
cufflinks 0.145        

0 Strain