Gene : Glyma.13G087400 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR10551//PTHR10551:SF12 - FASCIN Genomic Order:  874
Name:  ? Glyma.13G087400 Secondary Identifier:  ? PAC:30504159
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G087400 0.5kb upstream 0.5kb upstream 6241 true Chr13: 20020954-20027194 Glycine max
Glyma.13G087400 0.5kb upstream 0.5kb upstream 500 false Chr13: 20026695-20027194 Glycine max
Glyma.13G087400 0.5kb downstream 0.5kb downstream 6241 true Chr13: 20020454-20026694 Glycine max
Glyma.13G087400 0.5kb downstream 0.5kb downstream 500 false Chr13: 20020454-20020953 Glycine max
Glyma.13G087400 1.0kb upstream 1.0kb upstream 6741 true Chr13: 20020954-20027694 Glycine max
Glyma.13G087400 1.0kb upstream 1.0kb upstream 1000 false Chr13: 20026695-20027694 Glycine max
Glyma.13G087400 1.0kb downstream 1.0kb downstream 6741 true Chr13: 20019954-20026694 Glycine max
Glyma.13G087400 1.0kb downstream 1.0kb downstream 1000 false Chr13: 20019954-20020953 Glycine max
Glyma.13G087400 2.0kb upstream 2.0kb upstream 7741 true Chr13: 20020954-20028694 Glycine max
Glyma.13G087400 2.0kb upstream 2.0kb upstream 2000 false Chr13: 20026695-20028694 Glycine max
Glyma.13G087400 2.0kb downstream 2.0kb downstream 7741 true Chr13: 20018954-20026694 Glycine max
Glyma.13G087400 2.0kb downstream 2.0kb downstream 2000 false Chr13: 20018954-20020953 Glycine max
Glyma.13G087400 5.0kb upstream 5.0kb upstream 10741 true Chr13: 20020954-20031694 Glycine max
Glyma.13G087400 5.0kb upstream 5.0kb upstream 5000 false Chr13: 20026695-20031694 Glycine max
Glyma.13G087400 5.0kb downstream 5.0kb downstream 10741 true Chr13: 20015954-20026694 Glycine max
Glyma.13G087400 5.0kb downstream 5.0kb downstream 5000 false Chr13: 20015954-20020953 Glycine max
Glyma.13G087400 10.0kb upstream 10.0kb upstream 15741 true Chr13: 20020954-20036694 Glycine max
Glyma.13G087400 10.0kb upstream 10.0kb upstream 10000 false Chr13: 20026695-20036694 Glycine max
Glyma.13G087400 10.0kb downstream 10.0kb downstream 15741 true Chr13: 20010954-20026694 Glycine max
Glyma.13G087400 10.0kb downstream 10.0kb downstream 10000 false Chr13: 20010954-20020953 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311820 5265 Fabidae View MSA
124070135 5270 Rosid View MSA
123746465 5271 Pentapetalae View MSA
122796777 5272 Eudicot View MSA
122048839 5273 Angiosperm View MSA
121348630 5274 Embryophyte View MSA
123380948 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.04234 0.0 26.5373   High
cufflinks 0.0116372 0.0 0.0653767 Low Low
cufflinks 0.0146714 0.0 0.0750491 Low Low
cufflinks 0.0883309 0.0 0.680877 Low  
cufflinks 0.608327 0.0 3.74464    
cufflinks 4.10654 0.0 18.0843   High
cufflinks 0.0682732 0.0 0.274137 Low  
cufflinks 0.618558 0.0 2.80519    
cufflinks 2.48334 0.0 10.7225    
cufflinks 0.005     Low Low
cufflinks 1.616       High
cufflinks 0.005     Low Low
cufflinks 0.02     Low  
cufflinks 0.015     Low Low
cufflinks 0.345        
cufflinks 0.28        
cufflinks 0.249        
cufflinks 0.008     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.394        
cufflinks 0.826        
cufflinks 0.377        
cufflinks 0.23        
cufflinks 0.593        
cufflinks 0.292        
cufflinks 0.322        

0 Strain