Gene : Glyma.13G087500 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR10551//PTHR10551:SF12 - FASCIN Genomic Order:  875
Name:  ? Glyma.13G087500 Secondary Identifier:  ? PAC:30505567
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Ontology Annotation Displayer

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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G087500 0.5kb upstream 0.5kb upstream 5343 true Chr13: 20035830-20041172 Glycine max
Glyma.13G087500 0.5kb upstream 0.5kb upstream 500 false Chr13: 20040673-20041172 Glycine max
Glyma.13G087500 0.5kb downstream 0.5kb downstream 5343 true Chr13: 20035330-20040672 Glycine max
Glyma.13G087500 0.5kb downstream 0.5kb downstream 500 false Chr13: 20035330-20035829 Glycine max
Glyma.13G087500 1.0kb upstream 1.0kb upstream 5843 true Chr13: 20035830-20041672 Glycine max
Glyma.13G087500 1.0kb upstream 1.0kb upstream 1000 false Chr13: 20040673-20041672 Glycine max
Glyma.13G087500 1.0kb downstream 1.0kb downstream 5843 true Chr13: 20034830-20040672 Glycine max
Glyma.13G087500 1.0kb downstream 1.0kb downstream 1000 false Chr13: 20034830-20035829 Glycine max
Glyma.13G087500 2.0kb upstream 2.0kb upstream 6843 true Chr13: 20035830-20042672 Glycine max
Glyma.13G087500 2.0kb upstream 2.0kb upstream 2000 false Chr13: 20040673-20042672 Glycine max
Glyma.13G087500 2.0kb downstream 2.0kb downstream 6843 true Chr13: 20033830-20040672 Glycine max
Glyma.13G087500 2.0kb downstream 2.0kb downstream 2000 false Chr13: 20033830-20035829 Glycine max
Glyma.13G087500 5.0kb upstream 5.0kb upstream 9843 true Chr13: 20035830-20045672 Glycine max
Glyma.13G087500 5.0kb upstream 5.0kb upstream 5000 false Chr13: 20040673-20045672 Glycine max
Glyma.13G087500 5.0kb downstream 5.0kb downstream 9843 true Chr13: 20030830-20040672 Glycine max
Glyma.13G087500 5.0kb downstream 5.0kb downstream 5000 false Chr13: 20030830-20035829 Glycine max
Glyma.13G087500 10.0kb upstream 10.0kb upstream 14843 true Chr13: 20035830-20050672 Glycine max
Glyma.13G087500 10.0kb upstream 10.0kb upstream 10000 false Chr13: 20040673-20050672 Glycine max
Glyma.13G087500 10.0kb downstream 10.0kb downstream 14843 true Chr13: 20025830-20040672 Glycine max
Glyma.13G087500 10.0kb downstream 10.0kb downstream 10000 false Chr13: 20025830-20035829 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311820 5265 Fabidae View MSA
124070135 5270 Rosid View MSA
123746465 5271 Pentapetalae View MSA
122796777 5272 Eudicot View MSA
122048839 5273 Angiosperm View MSA
121348630 5274 Embryophyte View MSA
123380948 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 42.3946 0.0 118.802 High High
cufflinks 0.0749998 0.0 0.298852 Low Low
cufflinks 3.06137 0.0 9.29568    
cufflinks 0.0652681 0.0 0.261314 Low Low
cufflinks 6.07425 0.0 17.0411    
cufflinks 43.8888 0.0 123.54 High High
cufflinks 0.0196141 0.0 0.0844761 Low Low
cufflinks 3.38232 0.0 10.1589    
cufflinks 13.5279 0.0 36.1513    
cufflinks 1.67        
cufflinks 30.955     High  
cufflinks 2.039        
cufflinks 10.174     High  
cufflinks 2.063        
cufflinks 18.101     High  
cufflinks 1.816        
cufflinks 87.528     High High
cufflinks 0.267       Low
cufflinks 0.376       Low
cufflinks 0.869        
cufflinks 49.608     High High
cufflinks 1.744        
cufflinks 2.398        
cufflinks 67.717     High High
cufflinks 0.832        
cufflinks 69.029     High High

0 Strain