Gene : Glyma.13G092800 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR33307:SF2 - BNR/ASP-BOX REPEAT FAMILY PROTEIN Genomic Order:  928
Name:  ? Glyma.13G092800 Secondary Identifier:  ? PAC:30503348
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G092800 0.5kb upstream 0.5kb upstream 4575 true Chr13: 20779704-20784278 Glycine max
Glyma.13G092800 0.5kb upstream 0.5kb upstream 500 false Chr13: 20783779-20784278 Glycine max
Glyma.13G092800 0.5kb downstream 0.5kb downstream 4575 true Chr13: 20779204-20783778 Glycine max
Glyma.13G092800 0.5kb downstream 0.5kb downstream 500 false Chr13: 20779204-20779703 Glycine max
Glyma.13G092800 1.0kb upstream 1.0kb upstream 5075 true Chr13: 20779704-20784778 Glycine max
Glyma.13G092800 1.0kb upstream 1.0kb upstream 1000 false Chr13: 20783779-20784778 Glycine max
Glyma.13G092800 1.0kb downstream 1.0kb downstream 5075 true Chr13: 20778704-20783778 Glycine max
Glyma.13G092800 1.0kb downstream 1.0kb downstream 1000 false Chr13: 20778704-20779703 Glycine max
Glyma.13G092800 2.0kb upstream 2.0kb upstream 6075 true Chr13: 20779704-20785778 Glycine max
Glyma.13G092800 2.0kb upstream 2.0kb upstream 2000 false Chr13: 20783779-20785778 Glycine max
Glyma.13G092800 2.0kb downstream 2.0kb downstream 6075 true Chr13: 20777704-20783778 Glycine max
Glyma.13G092800 2.0kb downstream 2.0kb downstream 2000 false Chr13: 20777704-20779703 Glycine max
Glyma.13G092800 5.0kb upstream 5.0kb upstream 9075 true Chr13: 20779704-20788778 Glycine max
Glyma.13G092800 5.0kb upstream 5.0kb upstream 5000 false Chr13: 20783779-20788778 Glycine max
Glyma.13G092800 5.0kb downstream 5.0kb downstream 9075 true Chr13: 20774704-20783778 Glycine max
Glyma.13G092800 5.0kb downstream 5.0kb downstream 5000 false Chr13: 20774704-20779703 Glycine max
Glyma.13G092800 10.0kb upstream 10.0kb upstream 14075 true Chr13: 20779704-20793778 Glycine max
Glyma.13G092800 10.0kb upstream 10.0kb upstream 10000 false Chr13: 20783779-20793778 Glycine max
Glyma.13G092800 10.0kb downstream 10.0kb downstream 14075 true Chr13: 20769704-20783778 Glycine max
Glyma.13G092800 10.0kb downstream 10.0kb downstream 10000 false Chr13: 20769704-20779703 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297380 5265 Fabidae View MSA
124050154 5270 Rosid View MSA
123741218 5271 Pentapetalae View MSA
122786706 5272 Eudicot View MSA
122044355 5273 Angiosperm View MSA
121343996 5274 Embryophyte View MSA
123425973 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.427324 0.0 1.60285   Low
cufflinks 2.17231 0.0 7.21664    
cufflinks 3.46481 0.0 10.7054    
cufflinks 10.4557 0.0 28.5589   High
cufflinks 1.70366 0.0 5.82665    
cufflinks 1.10969 0.0 3.93616    
cufflinks 6.44966 0.0 18.4762   High
cufflinks 0.382775 0.0 1.44316   Low
cufflinks 2.53261 0.0 8.23494    
cufflinks 0.157       Low
cufflinks 0.084       Low
cufflinks 0.671        
cufflinks 1.225        
cufflinks 1.439        
cufflinks 1.055        
cufflinks 2.837       High
cufflinks 0.161       Low
cufflinks 0.962        
cufflinks 2.564        
cufflinks 1.403        
cufflinks 0.189       Low
cufflinks 2.246        
cufflinks 3.877       High
cufflinks 0.084       Low
cufflinks 2.561        
cufflinks 0.264        

0 Strain