Gene : Glyma.13G092900 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR33307:SF2 - BNR/ASP-BOX REPEAT FAMILY PROTEIN Genomic Order:  929
Name:  ? Glyma.13G092900 Secondary Identifier:  ? PAC:30502941
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G092900 0.5kb upstream 0.5kb upstream 4175 true Chr13: 20789889-20794063 Glycine max
Glyma.13G092900 0.5kb upstream 0.5kb upstream 500 false Chr13: 20793564-20794063 Glycine max
Glyma.13G092900 0.5kb downstream 0.5kb downstream 4175 true Chr13: 20789389-20793563 Glycine max
Glyma.13G092900 0.5kb downstream 0.5kb downstream 500 false Chr13: 20789389-20789888 Glycine max
Glyma.13G092900 1.0kb upstream 1.0kb upstream 4675 true Chr13: 20789889-20794563 Glycine max
Glyma.13G092900 1.0kb upstream 1.0kb upstream 1000 false Chr13: 20793564-20794563 Glycine max
Glyma.13G092900 1.0kb downstream 1.0kb downstream 4675 true Chr13: 20788889-20793563 Glycine max
Glyma.13G092900 1.0kb downstream 1.0kb downstream 1000 false Chr13: 20788889-20789888 Glycine max
Glyma.13G092900 2.0kb upstream 2.0kb upstream 5675 true Chr13: 20789889-20795563 Glycine max
Glyma.13G092900 2.0kb upstream 2.0kb upstream 2000 false Chr13: 20793564-20795563 Glycine max
Glyma.13G092900 2.0kb downstream 2.0kb downstream 5675 true Chr13: 20787889-20793563 Glycine max
Glyma.13G092900 2.0kb downstream 2.0kb downstream 2000 false Chr13: 20787889-20789888 Glycine max
Glyma.13G092900 5.0kb upstream 5.0kb upstream 8675 true Chr13: 20789889-20798563 Glycine max
Glyma.13G092900 5.0kb upstream 5.0kb upstream 5000 false Chr13: 20793564-20798563 Glycine max
Glyma.13G092900 5.0kb downstream 5.0kb downstream 8675 true Chr13: 20784889-20793563 Glycine max
Glyma.13G092900 5.0kb downstream 5.0kb downstream 5000 false Chr13: 20784889-20789888 Glycine max
Glyma.13G092900 10.0kb upstream 10.0kb upstream 13675 true Chr13: 20789889-20803563 Glycine max
Glyma.13G092900 10.0kb upstream 10.0kb upstream 10000 false Chr13: 20793564-20803563 Glycine max
Glyma.13G092900 10.0kb downstream 10.0kb downstream 13675 true Chr13: 20779889-20793563 Glycine max
Glyma.13G092900 10.0kb downstream 10.0kb downstream 10000 false Chr13: 20779889-20789888 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304971 5265 Fabidae View MSA
124050154 5270 Rosid View MSA
123741218 5271 Pentapetalae View MSA
122786706 5272 Eudicot View MSA
122044355 5273 Angiosperm View MSA
121343996 5274 Embryophyte View MSA
123425973 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.32255 0.0 1.23454    
cufflinks 1.16209 0.0 4.16435   High
cufflinks 0.353719 0.0 1.34645    
cufflinks 0.764458 0.0 2.80945    
cufflinks 0.685578 0.0 2.53631    
cufflinks 0.126408 0.0 0.502032 Low Low
cufflinks 1.32945 0.0 4.72117   High
cufflinks 0.942181 0.0 3.4209    
cufflinks 0.32429 0.0 1.24126    
cufflinks 0.531        
cufflinks 0.036     Low Low
cufflinks 0.565        
cufflinks 0.595        
cufflinks 0.715        
cufflinks 0.086       Low
cufflinks 0.945        
cufflinks 0.114        
cufflinks 0.831        
cufflinks 1.137        
cufflinks 1.297        
cufflinks 0.068       Low
cufflinks 1.249        
cufflinks 1.161        
cufflinks 0.063       Low
cufflinks 1.451       High
cufflinks 0.113        

0 Strain