Gene : Glyma.13G083300 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR10972:SF67 - OXYSTEROL-BINDING PROTEIN-RELATED PROTEIN 1D Genomic Order:  833
Name:  ? Glyma.13G083300 Secondary Identifier:  ? PAC:30502825
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G083300 0.5kb upstream 0.5kb upstream 8478 true Chr13: 19306337-19314814 Glycine max
Glyma.13G083300 0.5kb upstream 0.5kb upstream 500 false Chr13: 19306337-19306836 Glycine max
Glyma.13G083300 0.5kb downstream 0.5kb downstream 8478 true Chr13: 19306837-19315314 Glycine max
Glyma.13G083300 0.5kb downstream 0.5kb downstream 500 false Chr13: 19314815-19315314 Glycine max
Glyma.13G083300 1.0kb upstream 1.0kb upstream 8978 true Chr13: 19305837-19314814 Glycine max
Glyma.13G083300 1.0kb upstream 1.0kb upstream 1000 false Chr13: 19305837-19306836 Glycine max
Glyma.13G083300 1.0kb downstream 1.0kb downstream 8978 true Chr13: 19306837-19315814 Glycine max
Glyma.13G083300 1.0kb downstream 1.0kb downstream 1000 false Chr13: 19314815-19315814 Glycine max
Glyma.13G083300 2.0kb upstream 2.0kb upstream 9978 true Chr13: 19304837-19314814 Glycine max
Glyma.13G083300 2.0kb upstream 2.0kb upstream 2000 false Chr13: 19304837-19306836 Glycine max
Glyma.13G083300 2.0kb downstream 2.0kb downstream 9978 true Chr13: 19306837-19316814 Glycine max
Glyma.13G083300 2.0kb downstream 2.0kb downstream 2000 false Chr13: 19314815-19316814 Glycine max
Glyma.13G083300 5.0kb upstream 5.0kb upstream 12978 true Chr13: 19301837-19314814 Glycine max
Glyma.13G083300 5.0kb upstream 5.0kb upstream 5000 false Chr13: 19301837-19306836 Glycine max
Glyma.13G083300 5.0kb downstream 5.0kb downstream 12978 true Chr13: 19306837-19319814 Glycine max
Glyma.13G083300 5.0kb downstream 5.0kb downstream 5000 false Chr13: 19314815-19319814 Glycine max
Glyma.13G083300 10.0kb upstream 10.0kb upstream 17978 true Chr13: 19296837-19314814 Glycine max
Glyma.13G083300 10.0kb upstream 10.0kb upstream 10000 false Chr13: 19296837-19306836 Glycine max
Glyma.13G083300 10.0kb downstream 10.0kb downstream 17978 true Chr13: 19306837-19324814 Glycine max
Glyma.13G083300 10.0kb downstream 10.0kb downstream 10000 false Chr13: 19314815-19324814 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041393 5273 Angiosperm View MSA
122255163 5265 Fabidae View MSA
124062971 5270 Rosid View MSA
123750665 5271 Pentapetalae View MSA
122795598 5272 Eudicot View MSA
121348669 5274 Embryophyte View MSA
123428535 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.42207 0.0 13.6137    
cufflinks 1.52349 0.0 9.47496   Low
cufflinks 6.37085 0.0 25.5733   High
cufflinks 2.86323 0.0 14.3876    
cufflinks 2.65892 0.0 12.7824    
cufflinks 2.05738 0.0 8.0115    
cufflinks 1.93039 0.0 7.71657    
cufflinks 1.42049 0.0 7.56852   Low
cufflinks 2.3415 0.0 8.7919    
cufflinks 0.29        
cufflinks 1.559       High
cufflinks 0.535        
cufflinks 0.349        
cufflinks 0.399        
cufflinks 1.065       High
cufflinks 0.262        
cufflinks 0.648        
cufflinks 0.4        
cufflinks 0.249        
cufflinks 0.18       Low
cufflinks 0.86        
cufflinks 0.236        
cufflinks 0.3        
cufflinks 1.255       High
cufflinks 0.184       Low
cufflinks 0.761        

0 Strain