Gene : Glyma.13G083400 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR23086:SF33 - PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 1-RELATED Genomic Order:  834
Name:  ? Glyma.13G083400 Secondary Identifier:  ? PAC:30502320
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-6351 Glycine max pathologic  
Gmax PWY-6352 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G083400 0.5kb upstream 0.5kb upstream 5276 true Chr13: 19398607-19403882 Glycine max
Glyma.13G083400 0.5kb upstream 0.5kb upstream 500 false Chr13: 19398607-19399106 Glycine max
Glyma.13G083400 0.5kb downstream 0.5kb downstream 5276 true Chr13: 19399107-19404382 Glycine max
Glyma.13G083400 0.5kb downstream 0.5kb downstream 500 false Chr13: 19403883-19404382 Glycine max
Glyma.13G083400 1.0kb upstream 1.0kb upstream 5776 true Chr13: 19398107-19403882 Glycine max
Glyma.13G083400 1.0kb upstream 1.0kb upstream 1000 false Chr13: 19398107-19399106 Glycine max
Glyma.13G083400 1.0kb downstream 1.0kb downstream 5776 true Chr13: 19399107-19404882 Glycine max
Glyma.13G083400 1.0kb downstream 1.0kb downstream 1000 false Chr13: 19403883-19404882 Glycine max
Glyma.13G083400 2.0kb upstream 2.0kb upstream 6776 true Chr13: 19397107-19403882 Glycine max
Glyma.13G083400 2.0kb upstream 2.0kb upstream 2000 false Chr13: 19397107-19399106 Glycine max
Glyma.13G083400 2.0kb downstream 2.0kb downstream 6776 true Chr13: 19399107-19405882 Glycine max
Glyma.13G083400 2.0kb downstream 2.0kb downstream 2000 false Chr13: 19403883-19405882 Glycine max
Glyma.13G083400 5.0kb upstream 5.0kb upstream 9776 true Chr13: 19394107-19403882 Glycine max
Glyma.13G083400 5.0kb upstream 5.0kb upstream 5000 false Chr13: 19394107-19399106 Glycine max
Glyma.13G083400 5.0kb downstream 5.0kb downstream 9776 true Chr13: 19399107-19408882 Glycine max
Glyma.13G083400 5.0kb downstream 5.0kb downstream 5000 false Chr13: 19403883-19408882 Glycine max
Glyma.13G083400 10.0kb upstream 10.0kb upstream 14776 true Chr13: 19389107-19403882 Glycine max
Glyma.13G083400 10.0kb upstream 10.0kb upstream 10000 false Chr13: 19389107-19399106 Glycine max
Glyma.13G083400 10.0kb downstream 10.0kb downstream 14776 true Chr13: 19399107-19413882 Glycine max
Glyma.13G083400 10.0kb downstream 10.0kb downstream 10000 false Chr13: 19403883-19413882 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311925 5265 Fabidae View MSA
124061441 5270 Rosid View MSA
123746948 5271 Pentapetalae View MSA
122794503 5272 Eudicot View MSA
122045455 5273 Angiosperm View MSA
121310450 5274 Embryophyte View MSA
123428791 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.5463 0.0 9.84391   Low
cufflinks 6.7212 0.0 18.0008    
cufflinks 5.54299 0.0 14.9499    
cufflinks 6.64198 0.0 17.789    
cufflinks 4.8437 0.0 13.1307    
cufflinks 10.7428 0.0 28.7367   High
cufflinks 9.02594 0.0 24.0823   High
cufflinks 5.35447 0.0 14.4701    
cufflinks 3.09838 0.0 8.72094   Low
cufflinks 7.42        
cufflinks 0.978       Low
cufflinks 6.621        
cufflinks 6.58        
cufflinks 3.596        
cufflinks 0.345       Low
cufflinks 5.861        
cufflinks 3.734        
cufflinks 4.31        
cufflinks 7.335        
cufflinks 4.593        
cufflinks 1.229       Low
cufflinks 4.917        
cufflinks 5.57        
cufflinks 1.18       Low
cufflinks 4.688        
cufflinks 3.811        

0 Strain