Gene : Glyma.13G084700 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR31384:SF19 - AUXIN RESPONSE FACTOR 17 Genomic Order:  847
Name:  ? Glyma.13G084700 Secondary Identifier:  ? PAC:30503790
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G084700 0.5kb upstream 0.5kb upstream 5017 true Chr13: 19585884-19590900 Glycine max
Glyma.13G084700 0.5kb upstream 0.5kb upstream 500 false Chr13: 19585884-19586383 Glycine max
Glyma.13G084700 0.5kb downstream 0.5kb downstream 5017 true Chr13: 19586384-19591400 Glycine max
Glyma.13G084700 0.5kb downstream 0.5kb downstream 500 false Chr13: 19590901-19591400 Glycine max
Glyma.13G084700 1.0kb upstream 1.0kb upstream 5517 true Chr13: 19585384-19590900 Glycine max
Glyma.13G084700 1.0kb upstream 1.0kb upstream 1000 false Chr13: 19585384-19586383 Glycine max
Glyma.13G084700 1.0kb downstream 1.0kb downstream 5517 true Chr13: 19586384-19591900 Glycine max
Glyma.13G084700 1.0kb downstream 1.0kb downstream 1000 false Chr13: 19590901-19591900 Glycine max
Glyma.13G084700 2.0kb upstream 2.0kb upstream 6517 true Chr13: 19584384-19590900 Glycine max
Glyma.13G084700 2.0kb upstream 2.0kb upstream 2000 false Chr13: 19584384-19586383 Glycine max
Glyma.13G084700 2.0kb downstream 2.0kb downstream 6517 true Chr13: 19586384-19592900 Glycine max
Glyma.13G084700 2.0kb downstream 2.0kb downstream 2000 false Chr13: 19590901-19592900 Glycine max
Glyma.13G084700 5.0kb upstream 5.0kb upstream 9517 true Chr13: 19581384-19590900 Glycine max
Glyma.13G084700 5.0kb upstream 5.0kb upstream 5000 false Chr13: 19581384-19586383 Glycine max
Glyma.13G084700 5.0kb downstream 5.0kb downstream 9517 true Chr13: 19586384-19595900 Glycine max
Glyma.13G084700 5.0kb downstream 5.0kb downstream 5000 false Chr13: 19590901-19595900 Glycine max
Glyma.13G084700 10.0kb upstream 10.0kb upstream 14517 true Chr13: 19576384-19590900 Glycine max
Glyma.13G084700 10.0kb upstream 10.0kb upstream 10000 false Chr13: 19576384-19586383 Glycine max
Glyma.13G084700 10.0kb downstream 10.0kb downstream 14517 true Chr13: 19586384-19600900 Glycine max
Glyma.13G084700 10.0kb downstream 10.0kb downstream 10000 false Chr13: 19590901-19600900 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309839 5265 Fabidae View MSA
124065816 5270 Rosid View MSA
123744136 5271 Pentapetalae View MSA
122770913 5272 Eudicot View MSA
122051947 5273 Angiosperm View MSA
121312823 5274 Embryophyte View MSA
123349961 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.29866 0.0 7.11603    
cufflinks 2.83336 0.0 8.54686    
cufflinks 1.36944 0.0 4.58858   Low
cufflinks 3.42596 0.0 10.0699    
cufflinks 2.56268 0.0 7.76715    
cufflinks 4.2434 0.0 12.0937   High
cufflinks 3.33409 0.0 9.78038    
cufflinks 5.00437 0.0 14.0554   High
cufflinks 2.00572 0.0 6.3292    
cufflinks 1.848        
cufflinks 0.304       Low
cufflinks 0.919        
cufflinks 1.457        
cufflinks 1.261        
cufflinks 1.455        
cufflinks 1.964        
cufflinks 0.967        
cufflinks 1.168        
cufflinks 2.091       High
cufflinks 1.768        
cufflinks 0.468       Low
cufflinks 1.946        
cufflinks 1.645        
cufflinks 0.523       Low
cufflinks 1.764        
cufflinks 0.595       Low

0 Strain