Gene : Glyma.13G118400 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31342:SF12 - F11A17.16 Genomic Order:  1184
Name:  ? Glyma.13G118400 Secondary Identifier:  ? PAC:30503562
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G118400 0.5kb upstream 0.5kb upstream 10147 true Chr13: 23113880-23124026 Glycine max
Glyma.13G118400 0.5kb upstream 0.5kb upstream 500 false Chr13: 23123527-23124026 Glycine max
Glyma.13G118400 0.5kb downstream 0.5kb downstream 10147 true Chr13: 23113380-23123526 Glycine max
Glyma.13G118400 0.5kb downstream 0.5kb downstream 500 false Chr13: 23113380-23113879 Glycine max
Glyma.13G118400 1.0kb upstream 1.0kb upstream 10647 true Chr13: 23113880-23124526 Glycine max
Glyma.13G118400 1.0kb upstream 1.0kb upstream 1000 false Chr13: 23123527-23124526 Glycine max
Glyma.13G118400 1.0kb downstream 1.0kb downstream 10647 true Chr13: 23112880-23123526 Glycine max
Glyma.13G118400 1.0kb downstream 1.0kb downstream 1000 false Chr13: 23112880-23113879 Glycine max
Glyma.13G118400 2.0kb upstream 2.0kb upstream 11647 true Chr13: 23113880-23125526 Glycine max
Glyma.13G118400 2.0kb upstream 2.0kb upstream 2000 false Chr13: 23123527-23125526 Glycine max
Glyma.13G118400 2.0kb downstream 2.0kb downstream 11647 true Chr13: 23111880-23123526 Glycine max
Glyma.13G118400 2.0kb downstream 2.0kb downstream 2000 false Chr13: 23111880-23113879 Glycine max
Glyma.13G118400 5.0kb upstream 5.0kb upstream 14647 true Chr13: 23113880-23128526 Glycine max
Glyma.13G118400 5.0kb upstream 5.0kb upstream 5000 false Chr13: 23123527-23128526 Glycine max
Glyma.13G118400 5.0kb downstream 5.0kb downstream 14647 true Chr13: 23108880-23123526 Glycine max
Glyma.13G118400 5.0kb downstream 5.0kb downstream 5000 false Chr13: 23108880-23113879 Glycine max
Glyma.13G118400 10.0kb upstream 10.0kb upstream 19647 true Chr13: 23113880-23133526 Glycine max
Glyma.13G118400 10.0kb upstream 10.0kb upstream 10000 false Chr13: 23123527-23133526 Glycine max
Glyma.13G118400 10.0kb downstream 10.0kb downstream 19647 true Chr13: 23103880-23123526 Glycine max
Glyma.13G118400 10.0kb downstream 10.0kb downstream 10000 false Chr13: 23103880-23113879 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310858 5265 Fabidae View MSA
124068159 5270 Rosid View MSA
123646677 5271 Pentapetalae View MSA
122790605 5272 Eudicot View MSA
122043379 5273 Angiosperm View MSA
121310114 5274 Embryophyte View MSA
123427495 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.72431 0.0 20.652    
cufflinks 0.854724 0.0 8.15565    
cufflinks 0.935937 0.0 10.7966    
cufflinks 2.15375 0.0 15.9997    
cufflinks 0.964537 0.0 8.84738    
cufflinks 0.241696 0.0 1.94171 Low Low
cufflinks 3.46675 0.0 24.3435   High
cufflinks 3.19663 0.0 23.434   High
cufflinks 1.16202 0.0 10.1928    
cufflinks 0.075     Low  
cufflinks 0.014     Low Low
cufflinks 0.051     Low  
cufflinks 0.022     Low  
cufflinks 0.024     Low  
cufflinks 0.022     Low  
cufflinks 0.044     Low  
cufflinks 0.056     Low  
cufflinks 0.116       High
cufflinks 0.061     Low  
cufflinks 0.161       High
cufflinks 0.028     Low  
cufflinks 0.069     Low  
cufflinks 0.03     Low  
cufflinks 0.012     Low Low
cufflinks 0.083     Low  
cufflinks 0.028     Low  

0 Strain