Gene : Glyma.13G120400 G. max Wm82.a2.v1
Defline:  (1 of 28) PF04576 - Zein-binding (Zein-binding) Genomic Order:  1204
Name:  ? Glyma.13G120400 Secondary Identifier:  ? PAC:30502120
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G120400 0.5kb upstream 0.5kb upstream 4774 true Chr13: 23311758-23316531 Glycine max
Glyma.13G120400 0.5kb upstream 0.5kb upstream 500 false Chr13: 23311758-23312257 Glycine max
Glyma.13G120400 0.5kb downstream 0.5kb downstream 4774 true Chr13: 23312258-23317031 Glycine max
Glyma.13G120400 0.5kb downstream 0.5kb downstream 500 false Chr13: 23316532-23317031 Glycine max
Glyma.13G120400 1.0kb upstream 1.0kb upstream 5274 true Chr13: 23311258-23316531 Glycine max
Glyma.13G120400 1.0kb upstream 1.0kb upstream 1000 false Chr13: 23311258-23312257 Glycine max
Glyma.13G120400 1.0kb downstream 1.0kb downstream 5274 true Chr13: 23312258-23317531 Glycine max
Glyma.13G120400 1.0kb downstream 1.0kb downstream 1000 false Chr13: 23316532-23317531 Glycine max
Glyma.13G120400 2.0kb upstream 2.0kb upstream 6274 true Chr13: 23310258-23316531 Glycine max
Glyma.13G120400 2.0kb upstream 2.0kb upstream 2000 false Chr13: 23310258-23312257 Glycine max
Glyma.13G120400 2.0kb downstream 2.0kb downstream 6274 true Chr13: 23312258-23318531 Glycine max
Glyma.13G120400 2.0kb downstream 2.0kb downstream 2000 false Chr13: 23316532-23318531 Glycine max
Glyma.13G120400 5.0kb upstream 5.0kb upstream 9274 true Chr13: 23307258-23316531 Glycine max
Glyma.13G120400 5.0kb upstream 5.0kb upstream 5000 false Chr13: 23307258-23312257 Glycine max
Glyma.13G120400 5.0kb downstream 5.0kb downstream 9274 true Chr13: 23312258-23321531 Glycine max
Glyma.13G120400 5.0kb downstream 5.0kb downstream 5000 false Chr13: 23316532-23321531 Glycine max
Glyma.13G120400 10.0kb upstream 10.0kb upstream 14274 true Chr13: 23302258-23316531 Glycine max
Glyma.13G120400 10.0kb upstream 10.0kb upstream 10000 false Chr13: 23302258-23312257 Glycine max
Glyma.13G120400 10.0kb downstream 10.0kb downstream 14274 true Chr13: 23312258-23326531 Glycine max
Glyma.13G120400 10.0kb downstream 10.0kb downstream 10000 false Chr13: 23316532-23326531 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314515 5265 Fabidae View MSA
124071861 5270 Rosid View MSA
123744785 5271 Pentapetalae View MSA
122794145 5272 Eudicot View MSA
122050916 5273 Angiosperm View MSA
121351297 5274 Embryophyte View MSA
123382108 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.255019 0.0 1.57818   Low
cufflinks 2.73598 0.0 11.0408    
cufflinks 8.5163 0.0 29.032   High
cufflinks 0.648265 0.0 3.4214    
cufflinks 0.675759 0.0 2.70263    
cufflinks 5.32293 0.0 20.8962    
cufflinks 5.0051 0.0 17.7399    
cufflinks 0.760056 0.0 3.81934    
cufflinks 2.56463 0.0 10.4142    
cufflinks 0.159        
cufflinks 0.061        
cufflinks 1.039       High
cufflinks 0.144        
cufflinks 0.071     Low  
cufflinks 0.799        
cufflinks 0.887        
cufflinks 0.025     Low Low
cufflinks 0.883        
cufflinks 1.103       High
cufflinks 0.887        
cufflinks 0.036     Low Low
cufflinks 0.771        
cufflinks 0.471        
cufflinks 0.012     Low Low
cufflinks 0.598        
cufflinks 0.035     Low Low

0 Strain