Gene : Glyma.13G120700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11514:SF53 - TRANSCRIPTION FACTOR BHLH3 Genomic Order:  1207
Name:  ? Glyma.13G120700 Secondary Identifier:  ? PAC:30505588
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G120700 0.5kb upstream 0.5kb upstream 2966 true Chr13: 23332370-23335335 Glycine max
Glyma.13G120700 0.5kb upstream 0.5kb upstream 500 false Chr13: 23332370-23332869 Glycine max
Glyma.13G120700 0.5kb downstream 0.5kb downstream 2966 true Chr13: 23332870-23335835 Glycine max
Glyma.13G120700 0.5kb downstream 0.5kb downstream 500 false Chr13: 23335336-23335835 Glycine max
Glyma.13G120700 1.0kb upstream 1.0kb upstream 3466 true Chr13: 23331870-23335335 Glycine max
Glyma.13G120700 1.0kb upstream 1.0kb upstream 1000 false Chr13: 23331870-23332869 Glycine max
Glyma.13G120700 1.0kb downstream 1.0kb downstream 3466 true Chr13: 23332870-23336335 Glycine max
Glyma.13G120700 1.0kb downstream 1.0kb downstream 1000 false Chr13: 23335336-23336335 Glycine max
Glyma.13G120700 2.0kb upstream 2.0kb upstream 4466 true Chr13: 23330870-23335335 Glycine max
Glyma.13G120700 2.0kb upstream 2.0kb upstream 2000 false Chr13: 23330870-23332869 Glycine max
Glyma.13G120700 2.0kb downstream 2.0kb downstream 4466 true Chr13: 23332870-23337335 Glycine max
Glyma.13G120700 2.0kb downstream 2.0kb downstream 2000 false Chr13: 23335336-23337335 Glycine max
Glyma.13G120700 5.0kb upstream 5.0kb upstream 7466 true Chr13: 23327870-23335335 Glycine max
Glyma.13G120700 5.0kb upstream 5.0kb upstream 5000 false Chr13: 23327870-23332869 Glycine max
Glyma.13G120700 5.0kb downstream 5.0kb downstream 7466 true Chr13: 23332870-23340335 Glycine max
Glyma.13G120700 5.0kb downstream 5.0kb downstream 5000 false Chr13: 23335336-23340335 Glycine max
Glyma.13G120700 10.0kb upstream 10.0kb upstream 12466 true Chr13: 23322870-23335335 Glycine max
Glyma.13G120700 10.0kb upstream 10.0kb upstream 10000 false Chr13: 23322870-23332869 Glycine max
Glyma.13G120700 10.0kb downstream 10.0kb downstream 12466 true Chr13: 23332870-23345335 Glycine max
Glyma.13G120700 10.0kb downstream 10.0kb downstream 10000 false Chr13: 23335336-23345335 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307426 5265 Fabidae View MSA
124062097 5270 Rosid View MSA
123736718 5271 Pentapetalae View MSA
122790494 5272 Eudicot View MSA
122049389 5273 Angiosperm View MSA
121351644 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.34524 0.0 19.8869    
cufflinks 11.6089 0.0 30.9822   High
cufflinks 13.8577 0.0 36.9984   High
cufflinks 8.17228 0.0 22.0056    
cufflinks 5.37359 0.0 14.8742   Low
cufflinks 6.51127 0.0 17.7441    
cufflinks 9.62892 0.0 25.7924    
cufflinks 7.803 0.0 21.0606    
cufflinks 4.5097 0.0 12.6765   Low
cufflinks 9.899     High  
cufflinks 13.482     High  
cufflinks 13.409     High  
cufflinks 6.797       Low
cufflinks 7.817     High Low
cufflinks 5.216     High Low
cufflinks 13.288     High  
cufflinks 11.156     High  
cufflinks 16.375     High High
cufflinks 16.903     High High
cufflinks 12.025     High  
cufflinks 8.517     High  
cufflinks 13.467     High  
cufflinks 15.591     High High
cufflinks 12.247     High  
cufflinks 11.325     High  
cufflinks 11.205     High  

0 Strain