Gene : Glyma.13G112000 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR33077:SF13 - PROTEIN TIFY 10A-RELATED Genomic Order:  1120
Name:  ? Glyma.13G112000 Secondary Identifier:  ? PAC:30502066
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G112000 0.5kb upstream 0.5kb upstream 4126 true Chr13: 22541186-22545311 Glycine max
Glyma.13G112000 0.5kb upstream 0.5kb upstream 500 false Chr13: 22541186-22541685 Glycine max
Glyma.13G112000 0.5kb downstream 0.5kb downstream 4126 true Chr13: 22541686-22545811 Glycine max
Glyma.13G112000 0.5kb downstream 0.5kb downstream 500 false Chr13: 22545312-22545811 Glycine max
Glyma.13G112000 1.0kb upstream 1.0kb upstream 4626 true Chr13: 22540686-22545311 Glycine max
Glyma.13G112000 1.0kb upstream 1.0kb upstream 1000 false Chr13: 22540686-22541685 Glycine max
Glyma.13G112000 1.0kb downstream 1.0kb downstream 4626 true Chr13: 22541686-22546311 Glycine max
Glyma.13G112000 1.0kb downstream 1.0kb downstream 1000 false Chr13: 22545312-22546311 Glycine max
Glyma.13G112000 2.0kb upstream 2.0kb upstream 5626 true Chr13: 22539686-22545311 Glycine max
Glyma.13G112000 2.0kb upstream 2.0kb upstream 2000 false Chr13: 22539686-22541685 Glycine max
Glyma.13G112000 2.0kb downstream 2.0kb downstream 5626 true Chr13: 22541686-22547311 Glycine max
Glyma.13G112000 2.0kb downstream 2.0kb downstream 2000 false Chr13: 22545312-22547311 Glycine max
Glyma.13G112000 5.0kb upstream 5.0kb upstream 8626 true Chr13: 22536686-22545311 Glycine max
Glyma.13G112000 5.0kb upstream 5.0kb upstream 5000 false Chr13: 22536686-22541685 Glycine max
Glyma.13G112000 5.0kb downstream 5.0kb downstream 8626 true Chr13: 22541686-22550311 Glycine max
Glyma.13G112000 5.0kb downstream 5.0kb downstream 5000 false Chr13: 22545312-22550311 Glycine max
Glyma.13G112000 10.0kb upstream 10.0kb upstream 13626 true Chr13: 22531686-22545311 Glycine max
Glyma.13G112000 10.0kb upstream 10.0kb upstream 10000 false Chr13: 22531686-22541685 Glycine max
Glyma.13G112000 10.0kb downstream 10.0kb downstream 13626 true Chr13: 22541686-22555311 Glycine max
Glyma.13G112000 10.0kb downstream 10.0kb downstream 10000 false Chr13: 22545312-22555311 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315145 5265 Fabidae View MSA
124071926 5270 Rosid View MSA
123747835 5271 Pentapetalae View MSA
122797679 5272 Eudicot View MSA
122046349 5273 Angiosperm View MSA
121349662 5274 Embryophyte View MSA
123381390 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.9023 0.0 37.1946   High
cufflinks 2.36186 0.0 7.52803    
cufflinks 6.03295 0.0 16.9586    
cufflinks 2.31352 0.0 7.41017    
cufflinks 5.41652 0.0 15.5001    
cufflinks 18.7112 0.0 49.9374   High
cufflinks 3.93126 0.0 11.7339    
cufflinks 1.12568 0.0 3.92623   Low
cufflinks 4.47452 0.0 13.0531    
cufflinks 81.883     High High
cufflinks 37.354     High  
cufflinks 19.022     High  
cufflinks 18.825     High  
cufflinks 3.614       Low
cufflinks 24.518     High  
cufflinks 5.099        
cufflinks 347.104     High High
cufflinks 13.72     High  
cufflinks 9.303     High  
cufflinks 3.172       Low
cufflinks 22.569     High  
cufflinks 2.729       Low
cufflinks 43.03     High  
cufflinks 20.196     High  
cufflinks 4.454       Low
cufflinks 93.433     High High

0 Strain