Gene : Glyma.13G112500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10772:SF0 - 20 KDA CHAPERONIN, CHLOROPLASTIC Genomic Order:  1125
Name:  ? Glyma.13G112500 Secondary Identifier:  ? PAC:30504830
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G112500 0.5kb upstream 0.5kb upstream 3002 true Chr13: 22582355-22585356 Glycine max
Glyma.13G112500 0.5kb upstream 0.5kb upstream 500 false Chr13: 22582355-22582854 Glycine max
Glyma.13G112500 0.5kb downstream 0.5kb downstream 3002 true Chr13: 22582855-22585856 Glycine max
Glyma.13G112500 0.5kb downstream 0.5kb downstream 500 false Chr13: 22585357-22585856 Glycine max
Glyma.13G112500 1.0kb upstream 1.0kb upstream 3502 true Chr13: 22581855-22585356 Glycine max
Glyma.13G112500 1.0kb upstream 1.0kb upstream 1000 false Chr13: 22581855-22582854 Glycine max
Glyma.13G112500 1.0kb downstream 1.0kb downstream 3502 true Chr13: 22582855-22586356 Glycine max
Glyma.13G112500 1.0kb downstream 1.0kb downstream 1000 false Chr13: 22585357-22586356 Glycine max
Glyma.13G112500 2.0kb upstream 2.0kb upstream 4502 true Chr13: 22580855-22585356 Glycine max
Glyma.13G112500 2.0kb upstream 2.0kb upstream 2000 false Chr13: 22580855-22582854 Glycine max
Glyma.13G112500 2.0kb downstream 2.0kb downstream 4502 true Chr13: 22582855-22587356 Glycine max
Glyma.13G112500 2.0kb downstream 2.0kb downstream 2000 false Chr13: 22585357-22587356 Glycine max
Glyma.13G112500 5.0kb upstream 5.0kb upstream 7502 true Chr13: 22577855-22585356 Glycine max
Glyma.13G112500 5.0kb upstream 5.0kb upstream 5000 false Chr13: 22577855-22582854 Glycine max
Glyma.13G112500 5.0kb downstream 5.0kb downstream 7502 true Chr13: 22582855-22590356 Glycine max
Glyma.13G112500 5.0kb downstream 5.0kb downstream 5000 false Chr13: 22585357-22590356 Glycine max
Glyma.13G112500 10.0kb upstream 10.0kb upstream 12502 true Chr13: 22572855-22585356 Glycine max
Glyma.13G112500 10.0kb upstream 10.0kb upstream 10000 false Chr13: 22572855-22582854 Glycine max
Glyma.13G112500 10.0kb downstream 10.0kb downstream 12502 true Chr13: 22582855-22595356 Glycine max
Glyma.13G112500 10.0kb downstream 10.0kb downstream 10000 false Chr13: 22585357-22595356 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297530 5265 Fabidae View MSA
124064772 5270 Rosid View MSA
123741725 5271 Pentapetalae View MSA
122790070 5272 Eudicot View MSA
122045141 5273 Angiosperm View MSA
121344791 5274 Embryophyte View MSA
123424643 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.78268 0.0 19.1202   Low
cufflinks 29.1663 0.0 99.9577 High High
cufflinks 3.87331 0.0 16.6489   Low
cufflinks 10.5131 0.0 39.1967    
cufflinks 19.3228 0.0 66.9314    
cufflinks 20.4168 0.0 70.09    
cufflinks 13.1092 0.0 46.9533    
cufflinks 7.07503 0.0 29.1671    
cufflinks 10.1506 0.0 38.1591    
cufflinks 4.5        
cufflinks 0.166       Low
cufflinks 4.703        
cufflinks 7.618     High  
cufflinks 10.613     High  
cufflinks 0.17       Low
cufflinks 16.533     High  
cufflinks 0.911        
cufflinks 4.753        
cufflinks 9.881     High  
cufflinks 12.308     High  
cufflinks 0.37       Low
cufflinks 12.12     High  
cufflinks 20.847     High High
cufflinks 0.166       Low
cufflinks 15.079     High  
cufflinks 0.944        

0 Strain