Gene : Glyma.13G112600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31384:SF21 - AUXIN RESPONSE FACTOR 19-RELATED Genomic Order:  1126
Name:  ? Glyma.13G112600 Secondary Identifier:  ? PAC:30506137
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G112600 0.5kb upstream 0.5kb upstream 8157 true Chr13: 22585808-22593964 Glycine max
Glyma.13G112600 0.5kb upstream 0.5kb upstream 500 false Chr13: 22593465-22593964 Glycine max
Glyma.13G112600 0.5kb downstream 0.5kb downstream 8157 true Chr13: 22585308-22593464 Glycine max
Glyma.13G112600 0.5kb downstream 0.5kb downstream 500 false Chr13: 22585308-22585807 Glycine max
Glyma.13G112600 1.0kb upstream 1.0kb upstream 8657 true Chr13: 22585808-22594464 Glycine max
Glyma.13G112600 1.0kb upstream 1.0kb upstream 1000 false Chr13: 22593465-22594464 Glycine max
Glyma.13G112600 1.0kb downstream 1.0kb downstream 8657 true Chr13: 22584808-22593464 Glycine max
Glyma.13G112600 1.0kb downstream 1.0kb downstream 1000 false Chr13: 22584808-22585807 Glycine max
Glyma.13G112600 2.0kb upstream 2.0kb upstream 9657 true Chr13: 22585808-22595464 Glycine max
Glyma.13G112600 2.0kb upstream 2.0kb upstream 2000 false Chr13: 22593465-22595464 Glycine max
Glyma.13G112600 2.0kb downstream 2.0kb downstream 9657 true Chr13: 22583808-22593464 Glycine max
Glyma.13G112600 2.0kb downstream 2.0kb downstream 2000 false Chr13: 22583808-22585807 Glycine max
Glyma.13G112600 5.0kb upstream 5.0kb upstream 12657 true Chr13: 22585808-22598464 Glycine max
Glyma.13G112600 5.0kb upstream 5.0kb upstream 5000 false Chr13: 22593465-22598464 Glycine max
Glyma.13G112600 5.0kb downstream 5.0kb downstream 12657 true Chr13: 22580808-22593464 Glycine max
Glyma.13G112600 5.0kb downstream 5.0kb downstream 5000 false Chr13: 22580808-22585807 Glycine max
Glyma.13G112600 10.0kb upstream 10.0kb upstream 17657 true Chr13: 22585808-22603464 Glycine max
Glyma.13G112600 10.0kb upstream 10.0kb upstream 10000 false Chr13: 22593465-22603464 Glycine max
Glyma.13G112600 10.0kb downstream 10.0kb downstream 17657 true Chr13: 22575808-22593464 Glycine max
Glyma.13G112600 10.0kb downstream 10.0kb downstream 10000 false Chr13: 22575808-22585807 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314345 5265 Fabidae View MSA
124073682 5270 Rosid View MSA
123741284 5271 Pentapetalae View MSA
122791344 5272 Eudicot View MSA
122042731 5273 Angiosperm View MSA
121351367 5274 Embryophyte View MSA
123382140 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.13482 0.0 8.55648    
cufflinks 3.45781 0.0 9.38065    
cufflinks 13.6515 0.0 37.7745   High
cufflinks 3.22166 0.0 8.77079    
cufflinks 4.31979 0.0 11.5993    
cufflinks 2.22687 0.0 6.2508   Low
cufflinks 5.51537 0.0 14.7248    
cufflinks 11.7353 0.0 32.0617   High
cufflinks 5.13674 0.0 13.726    
cufflinks 5.802        
cufflinks 1.953       Low
cufflinks 10.502     High High
cufflinks 3.64        
cufflinks 2.688        
cufflinks 3.529        
cufflinks 6.432        
cufflinks 10.603     High High
cufflinks 2.038       Low
cufflinks 3.59        
cufflinks 7.651     High  
cufflinks 3.206        
cufflinks 6.663        
cufflinks 3.314        
cufflinks 2.47       Low
cufflinks 9.703     High High
cufflinks 4.496        

0 Strain