Gene : Glyma.13G112700 G. max Wm82.a2.v1
Defline:  (1 of 3) 2.3.1.179 - Beta-ketoacyl-[acyl-carrier-protein] synthase II / KASII Genomic Order:  1127
Name:  ? Glyma.13G112700 Secondary Identifier:  ? PAC:30505030
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5973 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G112700 0.5kb upstream 0.5kb upstream 7332 true Chr13: 22631395-22638726 Glycine max
Glyma.13G112700 0.5kb upstream 0.5kb upstream 500 false Chr13: 22631395-22631894 Glycine max
Glyma.13G112700 0.5kb downstream 0.5kb downstream 7332 true Chr13: 22631895-22639226 Glycine max
Glyma.13G112700 0.5kb downstream 0.5kb downstream 500 false Chr13: 22638727-22639226 Glycine max
Glyma.13G112700 1.0kb upstream 1.0kb upstream 7832 true Chr13: 22630895-22638726 Glycine max
Glyma.13G112700 1.0kb upstream 1.0kb upstream 1000 false Chr13: 22630895-22631894 Glycine max
Glyma.13G112700 1.0kb downstream 1.0kb downstream 7832 true Chr13: 22631895-22639726 Glycine max
Glyma.13G112700 1.0kb downstream 1.0kb downstream 1000 false Chr13: 22638727-22639726 Glycine max
Glyma.13G112700 2.0kb upstream 2.0kb upstream 8832 true Chr13: 22629895-22638726 Glycine max
Glyma.13G112700 2.0kb upstream 2.0kb upstream 2000 false Chr13: 22629895-22631894 Glycine max
Glyma.13G112700 2.0kb downstream 2.0kb downstream 8832 true Chr13: 22631895-22640726 Glycine max
Glyma.13G112700 2.0kb downstream 2.0kb downstream 2000 false Chr13: 22638727-22640726 Glycine max
Glyma.13G112700 5.0kb upstream 5.0kb upstream 11832 true Chr13: 22626895-22638726 Glycine max
Glyma.13G112700 5.0kb upstream 5.0kb upstream 5000 false Chr13: 22626895-22631894 Glycine max
Glyma.13G112700 5.0kb downstream 5.0kb downstream 11832 true Chr13: 22631895-22643726 Glycine max
Glyma.13G112700 5.0kb downstream 5.0kb downstream 5000 false Chr13: 22638727-22643726 Glycine max
Glyma.13G112700 10.0kb upstream 10.0kb upstream 16832 true Chr13: 22621895-22638726 Glycine max
Glyma.13G112700 10.0kb upstream 10.0kb upstream 10000 false Chr13: 22621895-22631894 Glycine max
Glyma.13G112700 10.0kb downstream 10.0kb downstream 16832 true Chr13: 22631895-22648726 Glycine max
Glyma.13G112700 10.0kb downstream 10.0kb downstream 10000 false Chr13: 22638727-22648726 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311031 5265 Fabidae View MSA
124071420 5270 Rosid View MSA
123738483 5271 Pentapetalae View MSA
122792751 5272 Eudicot View MSA
122051170 5273 Angiosperm View MSA
121345587 5274 Embryophyte View MSA
123424058 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.5248 0.0 67.3908    
cufflinks 20.0203 0.0 80.1325    
cufflinks 6.48636 0.0 23.7409   Low
cufflinks 27.0709 0.0 114.375 High  
cufflinks 14.9086 0.0 50.937    
cufflinks 9.11059 0.0 31.8149   Low
cufflinks 37.5688 0.0 167.589 High High
cufflinks 16.1688 0.0 55.3351    
cufflinks 10.7007 0.0 36.9089    
cufflinks 2.327        
cufflinks 0.168       Low
cufflinks 1.515        
cufflinks 1.766        
cufflinks 2.34        
cufflinks 0.216       Low
cufflinks 2.203        
cufflinks 0.656        
cufflinks 1.809        
cufflinks 3.366       High
cufflinks 2.567        
cufflinks 0.275       Low
cufflinks 2.513        
cufflinks 3.062        
cufflinks 0.2       Low
cufflinks 2.911        
cufflinks 0.507        

0 Strain