Gene : Glyma.13G114700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR15629:SF2 - SH3 DOMAIN-CONTAINING YSC84-LIKE PROTEIN 1 Genomic Order:  1147
Name:  ? Glyma.13G114700 Secondary Identifier:  ? PAC:30503541
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G114700 0.5kb upstream 0.5kb upstream 4423 true Chr13: 22836410-22840832 Glycine max
Glyma.13G114700 0.5kb upstream 0.5kb upstream 500 false Chr13: 22836410-22836909 Glycine max
Glyma.13G114700 0.5kb downstream 0.5kb downstream 4423 true Chr13: 22836910-22841332 Glycine max
Glyma.13G114700 0.5kb downstream 0.5kb downstream 500 false Chr13: 22840833-22841332 Glycine max
Glyma.13G114700 1.0kb upstream 1.0kb upstream 4923 true Chr13: 22835910-22840832 Glycine max
Glyma.13G114700 1.0kb upstream 1.0kb upstream 1000 false Chr13: 22835910-22836909 Glycine max
Glyma.13G114700 1.0kb downstream 1.0kb downstream 4923 true Chr13: 22836910-22841832 Glycine max
Glyma.13G114700 1.0kb downstream 1.0kb downstream 1000 false Chr13: 22840833-22841832 Glycine max
Glyma.13G114700 2.0kb upstream 2.0kb upstream 5923 true Chr13: 22834910-22840832 Glycine max
Glyma.13G114700 2.0kb upstream 2.0kb upstream 2000 false Chr13: 22834910-22836909 Glycine max
Glyma.13G114700 2.0kb downstream 2.0kb downstream 5923 true Chr13: 22836910-22842832 Glycine max
Glyma.13G114700 2.0kb downstream 2.0kb downstream 2000 false Chr13: 22840833-22842832 Glycine max
Glyma.13G114700 5.0kb upstream 5.0kb upstream 8923 true Chr13: 22831910-22840832 Glycine max
Glyma.13G114700 5.0kb upstream 5.0kb upstream 5000 false Chr13: 22831910-22836909 Glycine max
Glyma.13G114700 5.0kb downstream 5.0kb downstream 8923 true Chr13: 22836910-22845832 Glycine max
Glyma.13G114700 5.0kb downstream 5.0kb downstream 5000 false Chr13: 22840833-22845832 Glycine max
Glyma.13G114700 10.0kb upstream 10.0kb upstream 13923 true Chr13: 22826910-22840832 Glycine max
Glyma.13G114700 10.0kb upstream 10.0kb upstream 10000 false Chr13: 22826910-22836909 Glycine max
Glyma.13G114700 10.0kb downstream 10.0kb downstream 13923 true Chr13: 22836910-22850832 Glycine max
Glyma.13G114700 10.0kb downstream 10.0kb downstream 10000 false Chr13: 22840833-22850832 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311551 5265 Fabidae View MSA
124061750 5270 Rosid View MSA
123737814 5271 Pentapetalae View MSA
122792588 5272 Eudicot View MSA
122046278 5273 Angiosperm View MSA
121345874 5274 Embryophyte View MSA
123426176 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.0255 0.0 42.7564    
cufflinks 7.53889 0.0 20.7536   Low
cufflinks 40.1847 0.0 112.278 High High
cufflinks 13.3114 0.0 35.6038    
cufflinks 10.12 0.0 27.3503    
cufflinks 24.6399 0.0 66.307 High High
cufflinks 10.6639 0.0 28.7575    
cufflinks 13.7812 0.0 36.8318    
cufflinks 10.7816 0.0 29.0226    
cufflinks 4.74       Low
cufflinks 17.776     High High
cufflinks 12.153     High  
cufflinks 5.139        
cufflinks 3.436       Low
cufflinks 8.785     High  
cufflinks 7.451     High  
cufflinks 9.615     High  
cufflinks 5.8        
cufflinks 5.217        
cufflinks 7.793     High  
cufflinks 13.566     High High
cufflinks 7.806     High  
cufflinks 5.403        
cufflinks 18.378     High High
cufflinks 7.49     High  
cufflinks 13.553     High High

0 Strain