Gene : Glyma.13G115000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR22942//PTHR22942:SF45 - RECA/RAD51/RADA DNA STRAND-PAIRING FAMILY MEMBER Genomic Order:  1150
Name:  ? Glyma.13G115000 Secondary Identifier:  ? PAC:30501409
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G115000 0.5kb upstream 0.5kb upstream 3232 true Chr13: 22869828-22873059 Glycine max
Glyma.13G115000 0.5kb upstream 0.5kb upstream 500 false Chr13: 22872560-22873059 Glycine max
Glyma.13G115000 0.5kb downstream 0.5kb downstream 3232 true Chr13: 22869328-22872559 Glycine max
Glyma.13G115000 0.5kb downstream 0.5kb downstream 500 false Chr13: 22869328-22869827 Glycine max
Glyma.13G115000 1.0kb upstream 1.0kb upstream 3732 true Chr13: 22869828-22873559 Glycine max
Glyma.13G115000 1.0kb upstream 1.0kb upstream 1000 false Chr13: 22872560-22873559 Glycine max
Glyma.13G115000 1.0kb downstream 1.0kb downstream 3732 true Chr13: 22868828-22872559 Glycine max
Glyma.13G115000 1.0kb downstream 1.0kb downstream 1000 false Chr13: 22868828-22869827 Glycine max
Glyma.13G115000 2.0kb upstream 2.0kb upstream 4732 true Chr13: 22869828-22874559 Glycine max
Glyma.13G115000 2.0kb upstream 2.0kb upstream 2000 false Chr13: 22872560-22874559 Glycine max
Glyma.13G115000 2.0kb downstream 2.0kb downstream 4732 true Chr13: 22867828-22872559 Glycine max
Glyma.13G115000 2.0kb downstream 2.0kb downstream 2000 false Chr13: 22867828-22869827 Glycine max
Glyma.13G115000 5.0kb upstream 5.0kb upstream 7732 true Chr13: 22869828-22877559 Glycine max
Glyma.13G115000 5.0kb upstream 5.0kb upstream 5000 false Chr13: 22872560-22877559 Glycine max
Glyma.13G115000 5.0kb downstream 5.0kb downstream 7732 true Chr13: 22864828-22872559 Glycine max
Glyma.13G115000 5.0kb downstream 5.0kb downstream 5000 false Chr13: 22864828-22869827 Glycine max
Glyma.13G115000 10.0kb upstream 10.0kb upstream 12732 true Chr13: 22869828-22882559 Glycine max
Glyma.13G115000 10.0kb upstream 10.0kb upstream 10000 false Chr13: 22872560-22882559 Glycine max
Glyma.13G115000 10.0kb downstream 10.0kb downstream 12732 true Chr13: 22859828-22872559 Glycine max
Glyma.13G115000 10.0kb downstream 10.0kb downstream 10000 false Chr13: 22859828-22869827 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314748 5265 Fabidae View MSA
124066806 5270 Rosid View MSA
123738723 5271 Pentapetalae View MSA
122787390 5272 Eudicot View MSA
122043134 5273 Angiosperm View MSA
121345482 5274 Embryophyte View MSA
123425434 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.06845 0.0 14.8099    
cufflinks 6.36554 0.0 18.0941    
cufflinks 4.29017 0.0 12.7921   Low
cufflinks 4.91563 0.0 14.4233    
cufflinks 7.6097 0.0 21.2313    
cufflinks 6.13739 0.0 17.4948    
cufflinks 9.91343 0.0 27.0901   High
cufflinks 4.91766 0.0 14.4062    
cufflinks 6.36907 0.0 18.0915    
cufflinks 3.492        
cufflinks 4.157        
cufflinks 2.934        
cufflinks 4.781       High
cufflinks 5.756       High
cufflinks 3.729        
cufflinks 3.12        
cufflinks 5.089       High
cufflinks 2.273       Low
cufflinks 4.615        
cufflinks 2.492       Low
cufflinks 4.188        
cufflinks 2.625       Low
cufflinks 3.653        
cufflinks 4.381        
cufflinks 2.539       Low
cufflinks 3.638        

0 Strain