Gene : Glyma.13G109600 G. max Wm82.a2.v1

Defline:  (1 of 4) PTHR15288:SF4 - DENN (AEX-3) DOMAIN-CONTAINING PROTEIN Genomic Order:  1096
Name:  ? Glyma.13G109600 Secondary Identifier:  ? PAC:30502539

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G109600 0.5kb upstream 0.5kb upstream 14017 true Chr13: 22335748-22349764 Glycine max
Glyma.13G109600 0.5kb upstream 0.5kb upstream 500 false Chr13: 22349265-22349764 Glycine max
Glyma.13G109600 0.5kb downstream 0.5kb downstream 14017 true Chr13: 22335248-22349264 Glycine max
Glyma.13G109600 0.5kb downstream 0.5kb downstream 500 false Chr13: 22335248-22335747 Glycine max
Glyma.13G109600 1.0kb upstream 1.0kb upstream 14517 true Chr13: 22335748-22350264 Glycine max
Glyma.13G109600 1.0kb upstream 1.0kb upstream 1000 false Chr13: 22349265-22350264 Glycine max
Glyma.13G109600 1.0kb downstream 1.0kb downstream 14517 true Chr13: 22334748-22349264 Glycine max
Glyma.13G109600 1.0kb downstream 1.0kb downstream 1000 false Chr13: 22334748-22335747 Glycine max
Glyma.13G109600 2.0kb upstream 2.0kb upstream 15517 true Chr13: 22335748-22351264 Glycine max
Glyma.13G109600 2.0kb upstream 2.0kb upstream 2000 false Chr13: 22349265-22351264 Glycine max
Glyma.13G109600 2.0kb downstream 2.0kb downstream 15517 true Chr13: 22333748-22349264 Glycine max
Glyma.13G109600 2.0kb downstream 2.0kb downstream 2000 false Chr13: 22333748-22335747 Glycine max
Glyma.13G109600 5.0kb upstream 5.0kb upstream 18517 true Chr13: 22335748-22354264 Glycine max
Glyma.13G109600 5.0kb upstream 5.0kb upstream 5000 false Chr13: 22349265-22354264 Glycine max
Glyma.13G109600 5.0kb downstream 5.0kb downstream 18517 true Chr13: 22330748-22349264 Glycine max
Glyma.13G109600 5.0kb downstream 5.0kb downstream 5000 false Chr13: 22330748-22335747 Glycine max
Glyma.13G109600 10.0kb upstream 10.0kb upstream 23517 true Chr13: 22335748-22359264 Glycine max
Glyma.13G109600 10.0kb upstream 10.0kb upstream 10000 false Chr13: 22349265-22359264 Glycine max
Glyma.13G109600 10.0kb downstream 10.0kb downstream 23517 true Chr13: 22325748-22349264 Glycine max
Glyma.13G109600 10.0kb downstream 10.0kb downstream 10000 false Chr13: 22325748-22335747 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122253864 5265 Fabidae View MSA
124069833 5270 Rosid View MSA
123750815 5271 Pentapetalae View MSA
122793034 5272 Eudicot View MSA
122046513 5273 Angiosperm View MSA
121343794 5274 Embryophyte View MSA
123425012 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.42332 0.0 25.334    
cufflinks 4.268 0.0 24.0269    
cufflinks 11.6456 0.0 72.3071   High
cufflinks 4.65051 0.0 29.6816    
cufflinks 4.62739 0.0 26.866    
cufflinks 2.56634 0.0 15.8363   Low
cufflinks 2.80072 0.0 19.9711    
cufflinks 4.7401 0.0 25.9623    
cufflinks 19.7968 0.0 116.746 High High
cufflinks 0.051     Low  
cufflinks 0.035     Low  
cufflinks 0.141       High
cufflinks 0.022     Low Low
cufflinks 0.018     Low Low
cufflinks 0.405       High
cufflinks 0.058     Low  
cufflinks 0.043     Low  
cufflinks 0.118        
cufflinks 0.082     Low  
cufflinks 0.063     Low  
cufflinks 0.029     Low  
cufflinks 0.07     Low  
cufflinks 0.069     Low  
cufflinks 0.045     Low  
cufflinks 0.061     Low  
cufflinks 0.033     Low  

0 Strain