Gene : Glyma.13G111100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31087:SF3 - PROTEIN LURP-ONE-RELATED 16-RELATED Genomic Order:  1111
Name:  ? Glyma.13G111100 Secondary Identifier:  ? PAC:30505088
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G111100 0.5kb upstream 0.5kb upstream 1300 true Chr13: 22467871-22469170 Glycine max
Glyma.13G111100 0.5kb upstream 0.5kb upstream 500 false Chr13: 22467871-22468370 Glycine max
Glyma.13G111100 0.5kb downstream 0.5kb downstream 1300 true Chr13: 22468371-22469670 Glycine max
Glyma.13G111100 0.5kb downstream 0.5kb downstream 500 false Chr13: 22469171-22469670 Glycine max
Glyma.13G111100 1.0kb upstream 1.0kb upstream 1800 true Chr13: 22467371-22469170 Glycine max
Glyma.13G111100 1.0kb upstream 1.0kb upstream 1000 false Chr13: 22467371-22468370 Glycine max
Glyma.13G111100 1.0kb downstream 1.0kb downstream 1800 true Chr13: 22468371-22470170 Glycine max
Glyma.13G111100 1.0kb downstream 1.0kb downstream 1000 false Chr13: 22469171-22470170 Glycine max
Glyma.13G111100 2.0kb upstream 2.0kb upstream 2800 true Chr13: 22466371-22469170 Glycine max
Glyma.13G111100 2.0kb upstream 2.0kb upstream 2000 false Chr13: 22466371-22468370 Glycine max
Glyma.13G111100 2.0kb downstream 2.0kb downstream 2800 true Chr13: 22468371-22471170 Glycine max
Glyma.13G111100 2.0kb downstream 2.0kb downstream 2000 false Chr13: 22469171-22471170 Glycine max
Glyma.13G111100 5.0kb upstream 5.0kb upstream 5800 true Chr13: 22463371-22469170 Glycine max
Glyma.13G111100 5.0kb upstream 5.0kb upstream 5000 false Chr13: 22463371-22468370 Glycine max
Glyma.13G111100 5.0kb downstream 5.0kb downstream 5800 true Chr13: 22468371-22474170 Glycine max
Glyma.13G111100 5.0kb downstream 5.0kb downstream 5000 false Chr13: 22469171-22474170 Glycine max
Glyma.13G111100 10.0kb upstream 10.0kb upstream 10800 true Chr13: 22458371-22469170 Glycine max
Glyma.13G111100 10.0kb upstream 10.0kb upstream 10000 false Chr13: 22458371-22468370 Glycine max
Glyma.13G111100 10.0kb downstream 10.0kb downstream 10800 true Chr13: 22468371-22479170 Glycine max
Glyma.13G111100 10.0kb downstream 10.0kb downstream 10000 false Chr13: 22469171-22479170 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027924 5273 Angiosperm View MSA
122315415 5265 Fabidae View MSA
124037935 5270 Rosid View MSA
123741313 5271 Pentapetalae View MSA
122787454 5272 Eudicot View MSA
121351653 5274 Embryophyte View MSA
123382260 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.735165 0.0 2.81379    
cufflinks 0.0368709 0.0 0.16721 Low Low
cufflinks 12.5746 0.0 37.1708   High
cufflinks 0.60622 0.0 2.33587    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 3.7359 0.0 13.0013    
cufflinks 0.0680224 0.0 0.292966 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.036     Low  
cufflinks 0.162        
cufflinks 10.618     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.045     Low  
cufflinks 0.026     Low  
cufflinks 0.023     Low  
cufflinks 0.023     Low  
cufflinks 0.145        
cufflinks 0.02     Low  
cufflinks 0.024     Low  
cufflinks 0.022     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.039     Low  
cufflinks 0.024     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.066     Low  

0 Strain