Gene : Glyma.13G111600 G. max Wm82.a2.v1
Defline:  (1 of 1) PF06172 - Cupin superfamily (DUF985) (Cupin_5) Genomic Order:  1116
Name:  ? Glyma.13G111600 Secondary Identifier:  ? PAC:30505980
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G111600 0.5kb upstream 0.5kb upstream 3592 true Chr13: 22508786-22512377 Glycine max
Glyma.13G111600 0.5kb upstream 0.5kb upstream 500 false Chr13: 22511878-22512377 Glycine max
Glyma.13G111600 0.5kb downstream 0.5kb downstream 3592 true Chr13: 22508286-22511877 Glycine max
Glyma.13G111600 0.5kb downstream 0.5kb downstream 500 false Chr13: 22508286-22508785 Glycine max
Glyma.13G111600 1.0kb upstream 1.0kb upstream 4092 true Chr13: 22508786-22512877 Glycine max
Glyma.13G111600 1.0kb upstream 1.0kb upstream 1000 false Chr13: 22511878-22512877 Glycine max
Glyma.13G111600 1.0kb downstream 1.0kb downstream 4092 true Chr13: 22507786-22511877 Glycine max
Glyma.13G111600 1.0kb downstream 1.0kb downstream 1000 false Chr13: 22507786-22508785 Glycine max
Glyma.13G111600 2.0kb upstream 2.0kb upstream 5092 true Chr13: 22508786-22513877 Glycine max
Glyma.13G111600 2.0kb upstream 2.0kb upstream 2000 false Chr13: 22511878-22513877 Glycine max
Glyma.13G111600 2.0kb downstream 2.0kb downstream 5092 true Chr13: 22506786-22511877 Glycine max
Glyma.13G111600 2.0kb downstream 2.0kb downstream 2000 false Chr13: 22506786-22508785 Glycine max
Glyma.13G111600 5.0kb upstream 5.0kb upstream 8092 true Chr13: 22508786-22516877 Glycine max
Glyma.13G111600 5.0kb upstream 5.0kb upstream 5000 false Chr13: 22511878-22516877 Glycine max
Glyma.13G111600 5.0kb downstream 5.0kb downstream 8092 true Chr13: 22503786-22511877 Glycine max
Glyma.13G111600 5.0kb downstream 5.0kb downstream 5000 false Chr13: 22503786-22508785 Glycine max
Glyma.13G111600 10.0kb upstream 10.0kb upstream 13092 true Chr13: 22508786-22521877 Glycine max
Glyma.13G111600 10.0kb upstream 10.0kb upstream 10000 false Chr13: 22511878-22521877 Glycine max
Glyma.13G111600 10.0kb downstream 10.0kb downstream 13092 true Chr13: 22498786-22511877 Glycine max
Glyma.13G111600 10.0kb downstream 10.0kb downstream 10000 false Chr13: 22498786-22508785 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299495 5265 Fabidae View MSA
124063762 5270 Rosid View MSA
123736862 5271 Pentapetalae View MSA
122786910 5272 Eudicot View MSA
122051010 5273 Angiosperm View MSA
121346638 5274 Embryophyte View MSA
123426052 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 45.4191 0.0 132.746 High High
cufflinks 22.1588 0.0 60.1962 High  
cufflinks 31.9496 0.0 89.7692 High  
cufflinks 22.6617 0.0 61.6987 High  
cufflinks 21.7808 0.0 59.0636 High  
cufflinks 21.2621 0.0 57.6385    
cufflinks 12.7864 0.0 34.1128   Low
cufflinks 29.9045 0.0 83.223 High  
cufflinks 16.5368 0.0 44.3102    
cufflinks 20.952     High  
cufflinks 13.236     High Low
cufflinks 24.163     High  
cufflinks 19.95     High  
cufflinks 18.54     High  
cufflinks 17.871     High  
cufflinks 23.477     High  
cufflinks 16.853     High  
cufflinks 21.636     High  
cufflinks 32.588     High High
cufflinks 24.965     High  
cufflinks 14.662     High Low
cufflinks 28.854     High High
cufflinks 27.077     High High
cufflinks 21.638     High  
cufflinks 23.369     High  
cufflinks 15.137     High Low

0 Strain