Gene : Glyma.13G104400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12072:SF4 - CWF19-LIKE PROTEIN 1 Genomic Order:  1044
Name:  ? Glyma.13G104400 Secondary Identifier:  ? PAC:30501221
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G104400 0.5kb upstream 0.5kb upstream 5144 true Chr13: 21903926-21909069 Glycine max
Glyma.13G104400 0.5kb upstream 0.5kb upstream 500 false Chr13: 21908570-21909069 Glycine max
Glyma.13G104400 0.5kb downstream 0.5kb downstream 5144 true Chr13: 21903426-21908569 Glycine max
Glyma.13G104400 0.5kb downstream 0.5kb downstream 500 false Chr13: 21903426-21903925 Glycine max
Glyma.13G104400 1.0kb upstream 1.0kb upstream 5644 true Chr13: 21903926-21909569 Glycine max
Glyma.13G104400 1.0kb upstream 1.0kb upstream 1000 false Chr13: 21908570-21909569 Glycine max
Glyma.13G104400 1.0kb downstream 1.0kb downstream 5644 true Chr13: 21902926-21908569 Glycine max
Glyma.13G104400 1.0kb downstream 1.0kb downstream 1000 false Chr13: 21902926-21903925 Glycine max
Glyma.13G104400 2.0kb upstream 2.0kb upstream 6644 true Chr13: 21903926-21910569 Glycine max
Glyma.13G104400 2.0kb upstream 2.0kb upstream 2000 false Chr13: 21908570-21910569 Glycine max
Glyma.13G104400 2.0kb downstream 2.0kb downstream 6644 true Chr13: 21901926-21908569 Glycine max
Glyma.13G104400 2.0kb downstream 2.0kb downstream 2000 false Chr13: 21901926-21903925 Glycine max
Glyma.13G104400 5.0kb upstream 5.0kb upstream 9644 true Chr13: 21903926-21913569 Glycine max
Glyma.13G104400 5.0kb upstream 5.0kb upstream 5000 false Chr13: 21908570-21913569 Glycine max
Glyma.13G104400 5.0kb downstream 5.0kb downstream 9644 true Chr13: 21898926-21908569 Glycine max
Glyma.13G104400 5.0kb downstream 5.0kb downstream 5000 false Chr13: 21898926-21903925 Glycine max
Glyma.13G104400 10.0kb upstream 10.0kb upstream 14644 true Chr13: 21903926-21918569 Glycine max
Glyma.13G104400 10.0kb upstream 10.0kb upstream 10000 false Chr13: 21908570-21918569 Glycine max
Glyma.13G104400 10.0kb downstream 10.0kb downstream 14644 true Chr13: 21893926-21908569 Glycine max
Glyma.13G104400 10.0kb downstream 10.0kb downstream 10000 false Chr13: 21893926-21903925 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026236 5273 Angiosperm View MSA
122305547 5265 Fabidae View MSA
124062399 5270 Rosid View MSA
123739435 5271 Pentapetalae View MSA
122790763 5272 Eudicot View MSA
121344253 5274 Embryophyte View MSA
123426244 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.01946 0.0 8.42549   Low
cufflinks 4.65156 0.0 17.6913    
cufflinks 4.97129 0.0 18.6167   High
cufflinks 4.40999 0.0 17.0139    
cufflinks 3.8488 0.0 15.354    
cufflinks 2.38045 0.0 9.40407   Low
cufflinks 4.06857 0.0 13.7585    
cufflinks 3.90127 0.0 15.4742    
cufflinks 2.89711 0.0 10.7615    
cufflinks 1.057        
cufflinks 0.35       Low
cufflinks 1.735        
cufflinks 1.329        
cufflinks 1.488        
cufflinks 0.692        
cufflinks 1.285        
cufflinks 0.627        
cufflinks 2.048       High
cufflinks 2.438       High
cufflinks 1.343        
cufflinks 0.412       Low
cufflinks 1.341        
cufflinks 2.179       High
cufflinks 0.379       Low
cufflinks 1.357        
cufflinks 0.572        

0 Strain