Gene : Glyma.13G107100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10052//PTHR10052:SF11 - 60S RIBOSOMAL PROTEIN L18A Genomic Order:  1071
Name:  ? Glyma.13G107100 Secondary Identifier:  ? PAC:30500467
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G107100 0.5kb upstream 0.5kb upstream 4966 true Chr13: 22165903-22170868 Glycine max
Glyma.13G107100 0.5kb upstream 0.5kb upstream 500 false Chr13: 22165903-22166402 Glycine max
Glyma.13G107100 0.5kb downstream 0.5kb downstream 4966 true Chr13: 22166403-22171368 Glycine max
Glyma.13G107100 0.5kb downstream 0.5kb downstream 500 false Chr13: 22170869-22171368 Glycine max
Glyma.13G107100 1.0kb upstream 1.0kb upstream 5466 true Chr13: 22165403-22170868 Glycine max
Glyma.13G107100 1.0kb upstream 1.0kb upstream 1000 false Chr13: 22165403-22166402 Glycine max
Glyma.13G107100 1.0kb downstream 1.0kb downstream 5466 true Chr13: 22166403-22171868 Glycine max
Glyma.13G107100 1.0kb downstream 1.0kb downstream 1000 false Chr13: 22170869-22171868 Glycine max
Glyma.13G107100 2.0kb upstream 2.0kb upstream 6466 true Chr13: 22164403-22170868 Glycine max
Glyma.13G107100 2.0kb upstream 2.0kb upstream 2000 false Chr13: 22164403-22166402 Glycine max
Glyma.13G107100 2.0kb downstream 2.0kb downstream 6466 true Chr13: 22166403-22172868 Glycine max
Glyma.13G107100 2.0kb downstream 2.0kb downstream 2000 false Chr13: 22170869-22172868 Glycine max
Glyma.13G107100 5.0kb upstream 5.0kb upstream 9466 true Chr13: 22161403-22170868 Glycine max
Glyma.13G107100 5.0kb upstream 5.0kb upstream 5000 false Chr13: 22161403-22166402 Glycine max
Glyma.13G107100 5.0kb downstream 5.0kb downstream 9466 true Chr13: 22166403-22175868 Glycine max
Glyma.13G107100 5.0kb downstream 5.0kb downstream 5000 false Chr13: 22170869-22175868 Glycine max
Glyma.13G107100 10.0kb upstream 10.0kb upstream 14466 true Chr13: 22156403-22170868 Glycine max
Glyma.13G107100 10.0kb upstream 10.0kb upstream 10000 false Chr13: 22156403-22166402 Glycine max
Glyma.13G107100 10.0kb downstream 10.0kb downstream 14466 true Chr13: 22166403-22180868 Glycine max
Glyma.13G107100 10.0kb downstream 10.0kb downstream 10000 false Chr13: 22170869-22180868 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027441 5273 Angiosperm View MSA
122311030 5265 Fabidae View MSA
124066289 5270 Rosid View MSA
123745455 5271 Pentapetalae View MSA
122796236 5272 Eudicot View MSA
121350597 5274 Embryophyte View MSA
123425775 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.41318 0.0 21.4328    
cufflinks 2.8922 0.0 13.7468   Low
cufflinks 7.76184 0.0 26.7903    
cufflinks 5.14938 0.0 23.266    
cufflinks 4.45486 0.0 18.6822    
cufflinks 17.1441 0.0 60.5219   High
cufflinks 7.95114 0.0 32.0283    
cufflinks 5.45755 0.0 21.8641    
cufflinks 6.14799 0.0 26.228    
cufflinks 0.279        
cufflinks 0.526       High
cufflinks 0.355        
cufflinks 0.495        
cufflinks 0.312        
cufflinks 0.395        
cufflinks 0.265       Low
cufflinks 0.475        
cufflinks 0.365        
cufflinks 0.237       Low
cufflinks 0.305        
cufflinks 0.531       High
cufflinks 0.32        
cufflinks 0.245       Low
cufflinks 0.734       High
cufflinks 0.313        
cufflinks 0.58       High

0 Strain