Gene : Glyma.13G140700 G. max Wm82.a2.v1
Defline:  (1 of 4) 4.1.1.20 - Diaminopimelate decarboxylase / Meso-2,6-diaminoheptanedioate carboxy-lyase Genomic Order:  1407
Name:  ? Glyma.13G140700 Secondary Identifier:  ? PAC:30501225
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5097 Glycine max pathologic  
Gmax PWY-724 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G140700 0.5kb upstream 0.5kb upstream 5998 true Chr13: 25326854-25332851 Glycine max
Glyma.13G140700 0.5kb upstream 0.5kb upstream 500 false Chr13: 25332352-25332851 Glycine max
Glyma.13G140700 0.5kb downstream 0.5kb downstream 5998 true Chr13: 25326354-25332351 Glycine max
Glyma.13G140700 0.5kb downstream 0.5kb downstream 500 false Chr13: 25326354-25326853 Glycine max
Glyma.13G140700 1.0kb upstream 1.0kb upstream 6498 true Chr13: 25326854-25333351 Glycine max
Glyma.13G140700 1.0kb upstream 1.0kb upstream 1000 false Chr13: 25332352-25333351 Glycine max
Glyma.13G140700 1.0kb downstream 1.0kb downstream 6498 true Chr13: 25325854-25332351 Glycine max
Glyma.13G140700 1.0kb downstream 1.0kb downstream 1000 false Chr13: 25325854-25326853 Glycine max
Glyma.13G140700 2.0kb upstream 2.0kb upstream 7498 true Chr13: 25326854-25334351 Glycine max
Glyma.13G140700 2.0kb upstream 2.0kb upstream 2000 false Chr13: 25332352-25334351 Glycine max
Glyma.13G140700 2.0kb downstream 2.0kb downstream 7498 true Chr13: 25324854-25332351 Glycine max
Glyma.13G140700 2.0kb downstream 2.0kb downstream 2000 false Chr13: 25324854-25326853 Glycine max
Glyma.13G140700 5.0kb upstream 5.0kb upstream 10498 true Chr13: 25326854-25337351 Glycine max
Glyma.13G140700 5.0kb upstream 5.0kb upstream 5000 false Chr13: 25332352-25337351 Glycine max
Glyma.13G140700 5.0kb downstream 5.0kb downstream 10498 true Chr13: 25321854-25332351 Glycine max
Glyma.13G140700 5.0kb downstream 5.0kb downstream 5000 false Chr13: 25321854-25326853 Glycine max
Glyma.13G140700 10.0kb upstream 10.0kb upstream 15498 true Chr13: 25326854-25342351 Glycine max
Glyma.13G140700 10.0kb upstream 10.0kb upstream 10000 false Chr13: 25332352-25342351 Glycine max
Glyma.13G140700 10.0kb downstream 10.0kb downstream 15498 true Chr13: 25316854-25332351 Glycine max
Glyma.13G140700 10.0kb downstream 10.0kb downstream 10000 false Chr13: 25316854-25326853 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309738 5265 Fabidae View MSA
124070276 5270 Rosid View MSA
123742733 5271 Pentapetalae View MSA
122796086 5272 Eudicot View MSA
122048449 5273 Angiosperm View MSA
121349416 5274 Embryophyte View MSA
123428095 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.6412 0.0 22.2213    
cufflinks 10.3507 0.0 36.1964   High
cufflinks 2.61722 0.0 12.9308   Low
cufflinks 9.88626 0.0 38.5216   High
cufflinks 5.84722 0.0 22.664    
cufflinks 3.03702 0.0 9.3044   Low
cufflinks 7.95214 0.0 28.9094    
cufflinks 8.98129 0.0 27.3267    
cufflinks 4.79327 0.0 19.4385    
cufflinks 1.306        
cufflinks 0.066       Low
cufflinks 0.926        
cufflinks 0.871        
cufflinks 1.257        
cufflinks 0.236        
cufflinks 0.858        
cufflinks 0.261        
cufflinks 1.343        
cufflinks 1.523       High
cufflinks 0.757        
cufflinks 0.102       Low
cufflinks 0.939        
cufflinks 1.159        
cufflinks 0.107       Low
cufflinks 0.772        
cufflinks 0.231        

0 Strain