Gene : Glyma.13G140800 G. max Wm82.a2.v1
Defline:  (1 of 40) PF00651//PF03000 - BTB/POZ domain (BTB) // NPH3 family (NPH3) Genomic Order:  1408
Name:  ? Glyma.13G140800 Secondary Identifier:  ? PAC:30500708
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G140800 0.5kb upstream 0.5kb upstream 3536 true Chr13: 25334906-25338441 Glycine max
Glyma.13G140800 0.5kb upstream 0.5kb upstream 500 false Chr13: 25334906-25335405 Glycine max
Glyma.13G140800 0.5kb downstream 0.5kb downstream 3536 true Chr13: 25335406-25338941 Glycine max
Glyma.13G140800 0.5kb downstream 0.5kb downstream 500 false Chr13: 25338442-25338941 Glycine max
Glyma.13G140800 1.0kb upstream 1.0kb upstream 4036 true Chr13: 25334406-25338441 Glycine max
Glyma.13G140800 1.0kb upstream 1.0kb upstream 1000 false Chr13: 25334406-25335405 Glycine max
Glyma.13G140800 1.0kb downstream 1.0kb downstream 4036 true Chr13: 25335406-25339441 Glycine max
Glyma.13G140800 1.0kb downstream 1.0kb downstream 1000 false Chr13: 25338442-25339441 Glycine max
Glyma.13G140800 2.0kb upstream 2.0kb upstream 5036 true Chr13: 25333406-25338441 Glycine max
Glyma.13G140800 2.0kb upstream 2.0kb upstream 2000 false Chr13: 25333406-25335405 Glycine max
Glyma.13G140800 2.0kb downstream 2.0kb downstream 5036 true Chr13: 25335406-25340441 Glycine max
Glyma.13G140800 2.0kb downstream 2.0kb downstream 2000 false Chr13: 25338442-25340441 Glycine max
Glyma.13G140800 5.0kb upstream 5.0kb upstream 8036 true Chr13: 25330406-25338441 Glycine max
Glyma.13G140800 5.0kb upstream 5.0kb upstream 5000 false Chr13: 25330406-25335405 Glycine max
Glyma.13G140800 5.0kb downstream 5.0kb downstream 8036 true Chr13: 25335406-25343441 Glycine max
Glyma.13G140800 5.0kb downstream 5.0kb downstream 5000 false Chr13: 25338442-25343441 Glycine max
Glyma.13G140800 10.0kb upstream 10.0kb upstream 13036 true Chr13: 25325406-25338441 Glycine max
Glyma.13G140800 10.0kb upstream 10.0kb upstream 10000 false Chr13: 25325406-25335405 Glycine max
Glyma.13G140800 10.0kb downstream 10.0kb downstream 13036 true Chr13: 25335406-25348441 Glycine max
Glyma.13G140800 10.0kb downstream 10.0kb downstream 10000 false Chr13: 25338442-25348441 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297641 5265 Fabidae View MSA
124036097 5270 Rosid View MSA
123743168 5271 Pentapetalae View MSA
122791271 5272 Eudicot View MSA
122050644 5273 Angiosperm View MSA
121312043 5274 Embryophyte View MSA
123349254 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0242035 0.0 0.103143 Low  
cufflinks 0.058063 0.0 0.234443 Low  
cufflinks 0.094501 0.0 0.373974 Low High
cufflinks 0.0129625 0.0 0.0581659 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0233638 0.0 0.099628 Low  
cufflinks 0.0119358 0.0 0.0539857 Low Low
cufflinks 0.02     Low  
cufflinks 0.006     Low  
cufflinks 0.222       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.91       High
cufflinks 0.023     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.026     Low  
cufflinks 0.024     Low  
cufflinks 0.007     Low  
cufflinks 0.017     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain