Gene : Glyma.13G141700 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR36738:SF1 - EXPRESSED PROTEIN Genomic Order:  1417
Name:  ? Glyma.13G141700 Secondary Identifier:  ? PAC:30504520
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G141700 0.5kb upstream 0.5kb upstream 3090 true Chr13: 25418928-25422017 Glycine max
Glyma.13G141700 0.5kb upstream 0.5kb upstream 500 false Chr13: 25421518-25422017 Glycine max
Glyma.13G141700 0.5kb downstream 0.5kb downstream 3090 true Chr13: 25418428-25421517 Glycine max
Glyma.13G141700 0.5kb downstream 0.5kb downstream 500 false Chr13: 25418428-25418927 Glycine max
Glyma.13G141700 1.0kb upstream 1.0kb upstream 3590 true Chr13: 25418928-25422517 Glycine max
Glyma.13G141700 1.0kb upstream 1.0kb upstream 1000 false Chr13: 25421518-25422517 Glycine max
Glyma.13G141700 1.0kb downstream 1.0kb downstream 3590 true Chr13: 25417928-25421517 Glycine max
Glyma.13G141700 1.0kb downstream 1.0kb downstream 1000 false Chr13: 25417928-25418927 Glycine max
Glyma.13G141700 2.0kb upstream 2.0kb upstream 4590 true Chr13: 25418928-25423517 Glycine max
Glyma.13G141700 2.0kb upstream 2.0kb upstream 2000 false Chr13: 25421518-25423517 Glycine max
Glyma.13G141700 2.0kb downstream 2.0kb downstream 4590 true Chr13: 25416928-25421517 Glycine max
Glyma.13G141700 2.0kb downstream 2.0kb downstream 2000 false Chr13: 25416928-25418927 Glycine max
Glyma.13G141700 5.0kb upstream 5.0kb upstream 7590 true Chr13: 25418928-25426517 Glycine max
Glyma.13G141700 5.0kb upstream 5.0kb upstream 5000 false Chr13: 25421518-25426517 Glycine max
Glyma.13G141700 5.0kb downstream 5.0kb downstream 7590 true Chr13: 25413928-25421517 Glycine max
Glyma.13G141700 5.0kb downstream 5.0kb downstream 5000 false Chr13: 25413928-25418927 Glycine max
Glyma.13G141700 10.0kb upstream 10.0kb upstream 12590 true Chr13: 25418928-25431517 Glycine max
Glyma.13G141700 10.0kb upstream 10.0kb upstream 10000 false Chr13: 25421518-25431517 Glycine max
Glyma.13G141700 10.0kb downstream 10.0kb downstream 12590 true Chr13: 25408928-25421517 Glycine max
Glyma.13G141700 10.0kb downstream 10.0kb downstream 10000 false Chr13: 25408928-25418927 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041422 5273 Angiosperm View MSA
122310679 5265 Fabidae View MSA
124061850 5270 Rosid View MSA
123751922 5271 Pentapetalae View MSA
122793004 5272 Eudicot View MSA
121347775 5274 Embryophyte View MSA
123423846 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.8077 0.0 66.5894 High  
cufflinks 50.7367 0.0 136.411 High High
cufflinks 4.32704 0.0 14.0022   Low
cufflinks 15.4469 0.0 42.5526    
cufflinks 17.1461 0.0 46.8657    
cufflinks 9.73312 0.0 28.1198    
cufflinks 43.0665 0.0 115.205 High High
cufflinks 19.5634 0.0 52.9835    
cufflinks 15.9115 0.0 43.6949    
cufflinks 10.318     High  
cufflinks 0.264       Low
cufflinks 2.965        
cufflinks 5.265        
cufflinks 6.268        
cufflinks 0.753       Low
cufflinks 24.545     High High
cufflinks 2.465        
cufflinks 4.651        
cufflinks 13.86     High  
cufflinks 13.826     High  
cufflinks 0.512       Low
cufflinks 20.085     High High
cufflinks 28.449     High High
cufflinks 0.212       Low
cufflinks 19.559     High  
cufflinks 0.74       Low

0 Strain