Gene : Glyma.13G142000 G. max Wm82.a2.v1
Genomic Order:  1420 Name:  ? Glyma.13G142000
Secondary Identifier:  ? PAC:30505618
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G142000 0.5kb upstream 0.5kb upstream 3991 true Chr13: 25446866-25450856 Glycine max
Glyma.13G142000 0.5kb upstream 0.5kb upstream 500 false Chr13: 25450357-25450856 Glycine max
Glyma.13G142000 0.5kb downstream 0.5kb downstream 3991 true Chr13: 25446366-25450356 Glycine max
Glyma.13G142000 0.5kb downstream 0.5kb downstream 500 false Chr13: 25446366-25446865 Glycine max
Glyma.13G142000 1.0kb upstream 1.0kb upstream 4491 true Chr13: 25446866-25451356 Glycine max
Glyma.13G142000 1.0kb upstream 1.0kb upstream 1000 false Chr13: 25450357-25451356 Glycine max
Glyma.13G142000 1.0kb downstream 1.0kb downstream 4491 true Chr13: 25445866-25450356 Glycine max
Glyma.13G142000 1.0kb downstream 1.0kb downstream 1000 false Chr13: 25445866-25446865 Glycine max
Glyma.13G142000 2.0kb upstream 2.0kb upstream 5491 true Chr13: 25446866-25452356 Glycine max
Glyma.13G142000 2.0kb upstream 2.0kb upstream 2000 false Chr13: 25450357-25452356 Glycine max
Glyma.13G142000 2.0kb downstream 2.0kb downstream 5491 true Chr13: 25444866-25450356 Glycine max
Glyma.13G142000 2.0kb downstream 2.0kb downstream 2000 false Chr13: 25444866-25446865 Glycine max
Glyma.13G142000 5.0kb upstream 5.0kb upstream 8491 true Chr13: 25446866-25455356 Glycine max
Glyma.13G142000 5.0kb upstream 5.0kb upstream 5000 false Chr13: 25450357-25455356 Glycine max
Glyma.13G142000 5.0kb downstream 5.0kb downstream 8491 true Chr13: 25441866-25450356 Glycine max
Glyma.13G142000 5.0kb downstream 5.0kb downstream 5000 false Chr13: 25441866-25446865 Glycine max
Glyma.13G142000 10.0kb upstream 10.0kb upstream 13491 true Chr13: 25446866-25460356 Glycine max
Glyma.13G142000 10.0kb upstream 10.0kb upstream 10000 false Chr13: 25450357-25460356 Glycine max
Glyma.13G142000 10.0kb downstream 10.0kb downstream 13491 true Chr13: 25436866-25450356 Glycine max
Glyma.13G142000 10.0kb downstream 10.0kb downstream 10000 false Chr13: 25436866-25446865 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305965 5265 Fabidae View MSA
124068486 5270 Rosid View MSA
123739763 5271 Pentapetalae View MSA
122789880 5272 Eudicot View MSA
122047185 5273 Angiosperm View MSA
121347839 5274 Embryophyte View MSA
123423892 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.254 0.0 49.8522   High
cufflinks 3.57175 0.0 11.9255    
cufflinks 5.48063 0.0 17.2333    
cufflinks 2.93896 0.0 10.0398    
cufflinks 3.04325 0.0 10.3518    
cufflinks 17.4378 0.0 47.7412   High
cufflinks 3.51794 0.0 11.7666    
cufflinks 2.50452 0.0 8.68909    
cufflinks 3.76157 0.0 12.4506    
cufflinks 0.557       Low
cufflinks 1.297        
cufflinks 1.086        
cufflinks 1.465        
cufflinks 0.986        
cufflinks 0.381       Low
cufflinks 2.008        
cufflinks 0.805        
cufflinks 1.142        
cufflinks 0.762        
cufflinks 1.948        
cufflinks 1.138        
cufflinks 2.402       High
cufflinks 1.108        
cufflinks 1.55        
cufflinks 2.633       High
cufflinks 2.033        

0 Strain