Gene : Glyma.13G142300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR20863:SF2 - ZINC FINGER PROTEIN 593 Genomic Order:  1423
Name:  ? Glyma.13G142300 Secondary Identifier:  ? PAC:30501744
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G142300 0.5kb upstream 0.5kb upstream 2575 true Chr13: 25503826-25506400 Glycine max
Glyma.13G142300 0.5kb upstream 0.5kb upstream 500 false Chr13: 25505901-25506400 Glycine max
Glyma.13G142300 0.5kb downstream 0.5kb downstream 2575 true Chr13: 25503326-25505900 Glycine max
Glyma.13G142300 0.5kb downstream 0.5kb downstream 500 false Chr13: 25503326-25503825 Glycine max
Glyma.13G142300 1.0kb upstream 1.0kb upstream 3075 true Chr13: 25503826-25506900 Glycine max
Glyma.13G142300 1.0kb upstream 1.0kb upstream 1000 false Chr13: 25505901-25506900 Glycine max
Glyma.13G142300 1.0kb downstream 1.0kb downstream 3075 true Chr13: 25502826-25505900 Glycine max
Glyma.13G142300 1.0kb downstream 1.0kb downstream 1000 false Chr13: 25502826-25503825 Glycine max
Glyma.13G142300 2.0kb upstream 2.0kb upstream 4075 true Chr13: 25503826-25507900 Glycine max
Glyma.13G142300 2.0kb upstream 2.0kb upstream 2000 false Chr13: 25505901-25507900 Glycine max
Glyma.13G142300 2.0kb downstream 2.0kb downstream 4075 true Chr13: 25501826-25505900 Glycine max
Glyma.13G142300 2.0kb downstream 2.0kb downstream 2000 false Chr13: 25501826-25503825 Glycine max
Glyma.13G142300 5.0kb upstream 5.0kb upstream 7075 true Chr13: 25503826-25510900 Glycine max
Glyma.13G142300 5.0kb upstream 5.0kb upstream 5000 false Chr13: 25505901-25510900 Glycine max
Glyma.13G142300 5.0kb downstream 5.0kb downstream 7075 true Chr13: 25498826-25505900 Glycine max
Glyma.13G142300 5.0kb downstream 5.0kb downstream 5000 false Chr13: 25498826-25503825 Glycine max
Glyma.13G142300 10.0kb upstream 10.0kb upstream 12075 true Chr13: 25503826-25515900 Glycine max
Glyma.13G142300 10.0kb upstream 10.0kb upstream 10000 false Chr13: 25505901-25515900 Glycine max
Glyma.13G142300 10.0kb downstream 10.0kb downstream 12075 true Chr13: 25493826-25505900 Glycine max
Glyma.13G142300 10.0kb downstream 10.0kb downstream 10000 false Chr13: 25493826-25503825 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307141 5265 Fabidae View MSA
124062225 5270 Rosid View MSA
123752309 5271 Pentapetalae View MSA
122787626 5272 Eudicot View MSA
122041921 5273 Angiosperm View MSA
123428955 5275 Viridiplantae View MSA
121346205 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.8424 0.0 45.796    
cufflinks 20.1209 0.0 56.7036    
cufflinks 10.0618 0.0 30.9144   Low
cufflinks 16.6991 0.0 47.9411    
cufflinks 19.4419 0.0 54.7141    
cufflinks 21.4023 0.0 59.7674    
cufflinks 26.9521 0.0 73.7837 High High
cufflinks 17.4675 0.0 49.8986    
cufflinks 17.1036 0.0 48.9831    
cufflinks 3.155        
cufflinks 2.781        
cufflinks 3.791        
cufflinks 6.844       High
cufflinks 10.768     High High
cufflinks 1.625       Low
cufflinks 3.7        
cufflinks 2.798        
cufflinks 4.274        
cufflinks 4.704        
cufflinks 2.864        
cufflinks 2.91        
cufflinks 3.223        
cufflinks 4.612        
cufflinks 2.862        
cufflinks 3.174        
cufflinks 3.078        

0 Strain