Gene : Glyma.13G144900 G. max Wm82.a2.v1
Defline:  (1 of 6) 1.1.1.41 - Isocitrate dehydrogenase (NAD(+)) / Nicotinamide adenine dinucleotide isocitrate dehydrogenase Genomic Order:  1449
Name:  ? Glyma.13G144900 Secondary Identifier:  ? PAC:30503507
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5464 Glycine max pathologic  
Gmax PWY-5690 Glycine max pathologic  
Gmax PWY-6549 Glycine max pathologic  

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G144900 0.5kb upstream 0.5kb upstream 5481 true Chr13: 25748784-25754264 Glycine max
Glyma.13G144900 0.5kb upstream 0.5kb upstream 500 false Chr13: 25753765-25754264 Glycine max
Glyma.13G144900 0.5kb downstream 0.5kb downstream 5481 true Chr13: 25748284-25753764 Glycine max
Glyma.13G144900 0.5kb downstream 0.5kb downstream 500 false Chr13: 25748284-25748783 Glycine max
Glyma.13G144900 1.0kb upstream 1.0kb upstream 5981 true Chr13: 25748784-25754764 Glycine max
Glyma.13G144900 1.0kb upstream 1.0kb upstream 1000 false Chr13: 25753765-25754764 Glycine max
Glyma.13G144900 1.0kb downstream 1.0kb downstream 5981 true Chr13: 25747784-25753764 Glycine max
Glyma.13G144900 1.0kb downstream 1.0kb downstream 1000 false Chr13: 25747784-25748783 Glycine max
Glyma.13G144900 2.0kb upstream 2.0kb upstream 6981 true Chr13: 25748784-25755764 Glycine max
Glyma.13G144900 2.0kb upstream 2.0kb upstream 2000 false Chr13: 25753765-25755764 Glycine max
Glyma.13G144900 2.0kb downstream 2.0kb downstream 6981 true Chr13: 25746784-25753764 Glycine max
Glyma.13G144900 2.0kb downstream 2.0kb downstream 2000 false Chr13: 25746784-25748783 Glycine max
Glyma.13G144900 5.0kb upstream 5.0kb upstream 9981 true Chr13: 25748784-25758764 Glycine max
Glyma.13G144900 5.0kb upstream 5.0kb upstream 5000 false Chr13: 25753765-25758764 Glycine max
Glyma.13G144900 5.0kb downstream 5.0kb downstream 9981 true Chr13: 25743784-25753764 Glycine max
Glyma.13G144900 5.0kb downstream 5.0kb downstream 5000 false Chr13: 25743784-25748783 Glycine max
Glyma.13G144900 10.0kb upstream 10.0kb upstream 14981 true Chr13: 25748784-25763764 Glycine max
Glyma.13G144900 10.0kb upstream 10.0kb upstream 10000 false Chr13: 25753765-25763764 Glycine max
Glyma.13G144900 10.0kb downstream 10.0kb downstream 14981 true Chr13: 25738784-25753764 Glycine max
Glyma.13G144900 10.0kb downstream 10.0kb downstream 10000 false Chr13: 25738784-25748783 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302631 5265 Fabidae View MSA
124066571 5270 Rosid View MSA
123739712 5271 Pentapetalae View MSA
122792664 5272 Eudicot View MSA
122041698 5273 Angiosperm View MSA
121349734 5274 Embryophyte View MSA
123425496 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 27.2788 0.0 73.1791 High  
cufflinks 13.0467 0.0 35.1076   Low
cufflinks 22.1244 0.0 59.0654 High  
cufflinks 17.1316 0.0 45.7453    
cufflinks 21.5289 0.0 57.4684 High  
cufflinks 44.8727 0.0 124.244 High High
cufflinks 11.7598 0.0 31.8046   Low
cufflinks 19.7639 0.0 52.7284    
cufflinks 19.5646 0.0 52.1961    
cufflinks 10.156     High  
cufflinks 7.132     High  
cufflinks 8.088     High  
cufflinks 11.098     High High
cufflinks 10.943     High High
cufflinks 3.995       Low
cufflinks 5.013        
cufflinks 11.397     High High
cufflinks 8.694     High  
cufflinks 5.197        
cufflinks 4.694       Low
cufflinks 7.368     High  
cufflinks 5.235        
cufflinks 6.946        
cufflinks 8.25     High  
cufflinks 4.248       Low
cufflinks 10.378     High High

0 Strain