Gene : Glyma.13G145000 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR10362 - HISTIDINE AMMONIA-LYASE Genomic Order:  1450
Name:  ? Glyma.13G145000 Secondary Identifier:  ? PAC:30500660
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-1121 Glycine max pathologic  
Gmax PWY1F-467 Glycine max pathologic  
Gmax PWY-7186 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G145000 0.5kb upstream 0.5kb upstream 5607 true Chr13: 25758490-25764096 Glycine max
Glyma.13G145000 0.5kb upstream 0.5kb upstream 500 false Chr13: 25763597-25764096 Glycine max
Glyma.13G145000 0.5kb downstream 0.5kb downstream 5607 true Chr13: 25757990-25763596 Glycine max
Glyma.13G145000 0.5kb downstream 0.5kb downstream 500 false Chr13: 25757990-25758489 Glycine max
Glyma.13G145000 1.0kb upstream 1.0kb upstream 6107 true Chr13: 25758490-25764596 Glycine max
Glyma.13G145000 1.0kb upstream 1.0kb upstream 1000 false Chr13: 25763597-25764596 Glycine max
Glyma.13G145000 1.0kb downstream 1.0kb downstream 6107 true Chr13: 25757490-25763596 Glycine max
Glyma.13G145000 1.0kb downstream 1.0kb downstream 1000 false Chr13: 25757490-25758489 Glycine max
Glyma.13G145000 2.0kb upstream 2.0kb upstream 7107 true Chr13: 25758490-25765596 Glycine max
Glyma.13G145000 2.0kb upstream 2.0kb upstream 2000 false Chr13: 25763597-25765596 Glycine max
Glyma.13G145000 2.0kb downstream 2.0kb downstream 7107 true Chr13: 25756490-25763596 Glycine max
Glyma.13G145000 2.0kb downstream 2.0kb downstream 2000 false Chr13: 25756490-25758489 Glycine max
Glyma.13G145000 5.0kb upstream 5.0kb upstream 10107 true Chr13: 25758490-25768596 Glycine max
Glyma.13G145000 5.0kb upstream 5.0kb upstream 5000 false Chr13: 25763597-25768596 Glycine max
Glyma.13G145000 5.0kb downstream 5.0kb downstream 10107 true Chr13: 25753490-25763596 Glycine max
Glyma.13G145000 5.0kb downstream 5.0kb downstream 5000 false Chr13: 25753490-25758489 Glycine max
Glyma.13G145000 10.0kb upstream 10.0kb upstream 15107 true Chr13: 25758490-25773596 Glycine max
Glyma.13G145000 10.0kb upstream 10.0kb upstream 10000 false Chr13: 25763597-25773596 Glycine max
Glyma.13G145000 10.0kb downstream 10.0kb downstream 15107 true Chr13: 25748490-25763596 Glycine max
Glyma.13G145000 10.0kb downstream 10.0kb downstream 10000 false Chr13: 25748490-25758489 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311537 5265 Fabidae View MSA
124070450 5270 Rosid View MSA
123747775 5271 Pentapetalae View MSA
122795347 5272 Eudicot View MSA
122043246 5273 Angiosperm View MSA
121351477 5274 Embryophyte View MSA
123382181 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 157.518 0.0 625.516 High High
cufflinks 23.219 0.0 63.9781 High  
cufflinks 13.5988 0.0 36.3899   Low
cufflinks 33.1329 0.0 95.0144 High  
cufflinks 65.3933 0.0 209.293 High  
cufflinks 82.6566 0.0 277.144 High  
cufflinks 6.69112 0.0 18.0195   Low
cufflinks 55.6284 0.0 173.0 High  
cufflinks 33.6233 0.0 96.6739 High  
cufflinks 43.495     High  
cufflinks 11.985     High Low
cufflinks 9.064     High Low
cufflinks 39.262     High  
cufflinks 19.328     High  
cufflinks 5.267     High Low
cufflinks 22.701     High  
cufflinks 66.563     High High
cufflinks 15.828     High  
cufflinks 34.957     High  
cufflinks 19.88     High  
cufflinks 15.156     High  
cufflinks 31.866     High  
cufflinks 54.742     High High
cufflinks 35.499     High  
cufflinks 21.553     High  
cufflinks 43.709     High  

0 Strain