Gene : Glyma.13G146100 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR18952:SF100 - ALPHA CARBONIC ANHYDRASE 5 Genomic Order:  1461
Name:  ? Glyma.13G146100 Secondary Identifier:  ? PAC:30503982
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax CYANCAT-PWY Glycine max pathologic  
Gmax PWY-241 Glycine max pathologic  
Gmax PWY-7115 Glycine max pathologic  
Gmax PWY-7117 Glycine max pathologic  
Gmax PWYQT-4429 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G146100 0.5kb upstream 0.5kb upstream 3727 true Chr13: 25909895-25913621 Glycine max
Glyma.13G146100 0.5kb upstream 0.5kb upstream 500 false Chr13: 25909895-25910394 Glycine max
Glyma.13G146100 0.5kb downstream 0.5kb downstream 3727 true Chr13: 25910395-25914121 Glycine max
Glyma.13G146100 0.5kb downstream 0.5kb downstream 500 false Chr13: 25913622-25914121 Glycine max
Glyma.13G146100 1.0kb upstream 1.0kb upstream 4227 true Chr13: 25909395-25913621 Glycine max
Glyma.13G146100 1.0kb upstream 1.0kb upstream 1000 false Chr13: 25909395-25910394 Glycine max
Glyma.13G146100 1.0kb downstream 1.0kb downstream 4227 true Chr13: 25910395-25914621 Glycine max
Glyma.13G146100 1.0kb downstream 1.0kb downstream 1000 false Chr13: 25913622-25914621 Glycine max
Glyma.13G146100 2.0kb upstream 2.0kb upstream 5227 true Chr13: 25908395-25913621 Glycine max
Glyma.13G146100 2.0kb upstream 2.0kb upstream 2000 false Chr13: 25908395-25910394 Glycine max
Glyma.13G146100 2.0kb downstream 2.0kb downstream 5227 true Chr13: 25910395-25915621 Glycine max
Glyma.13G146100 2.0kb downstream 2.0kb downstream 2000 false Chr13: 25913622-25915621 Glycine max
Glyma.13G146100 5.0kb upstream 5.0kb upstream 8227 true Chr13: 25905395-25913621 Glycine max
Glyma.13G146100 5.0kb upstream 5.0kb upstream 5000 false Chr13: 25905395-25910394 Glycine max
Glyma.13G146100 5.0kb downstream 5.0kb downstream 8227 true Chr13: 25910395-25918621 Glycine max
Glyma.13G146100 5.0kb downstream 5.0kb downstream 5000 false Chr13: 25913622-25918621 Glycine max
Glyma.13G146100 10.0kb upstream 10.0kb upstream 13227 true Chr13: 25900395-25913621 Glycine max
Glyma.13G146100 10.0kb upstream 10.0kb upstream 10000 false Chr13: 25900395-25910394 Glycine max
Glyma.13G146100 10.0kb downstream 10.0kb downstream 13227 true Chr13: 25910395-25923621 Glycine max
Glyma.13G146100 10.0kb downstream 10.0kb downstream 10000 false Chr13: 25913622-25923621 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305121 5265 Fabidae View MSA
124071031 5270 Rosid View MSA
123753559 5271 Pentapetalae View MSA
122795540 5272 Eudicot View MSA
122047303 5273 Angiosperm View MSA
121351630 5274 Embryophyte View MSA
123428273 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.110727 0.0 0.443277 Low  
cufflinks 0.142467 0.0 0.564963 Low  
cufflinks 0.189833 0.0 0.74402 Low  
cufflinks 0.049058 0.0 0.204348 Low Low
cufflinks 1.45 0.0 5.14843    
cufflinks 4.86392 0.0 14.9518   High
cufflinks 0.262067 0.0 1.0166    
cufflinks 2.25198 0.0 7.65919    
cufflinks 3.40506 0.0 11.0043   High
cufflinks 3.437        
cufflinks 6.76     High  
cufflinks 0.345        
cufflinks 1.905        
cufflinks 0.691        
cufflinks 2.219        
cufflinks 0.045     Low Low
cufflinks 26.629     High High
cufflinks 1.436        
cufflinks 0.077     Low Low
cufflinks 0.033     Low Low
cufflinks 3.562        
cufflinks 0.106        
cufflinks 0.064     Low Low
cufflinks 4.316        
cufflinks 0.087     Low Low
cufflinks 17.083     High High

0 Strain