Gene : Glyma.13G146300 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR19139:SF52 - AQUAPORIN TIP1-1 Genomic Order:  1463
Name:  ? Glyma.13G146300 Secondary Identifier:  ? PAC:30506043
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G146300 0.5kb upstream 0.5kb upstream 2488 true Chr13: 25921889-25924376 Glycine max
Glyma.13G146300 0.5kb upstream 0.5kb upstream 500 false Chr13: 25923877-25924376 Glycine max
Glyma.13G146300 0.5kb downstream 0.5kb downstream 2488 true Chr13: 25921389-25923876 Glycine max
Glyma.13G146300 0.5kb downstream 0.5kb downstream 500 false Chr13: 25921389-25921888 Glycine max
Glyma.13G146300 1.0kb upstream 1.0kb upstream 2988 true Chr13: 25921889-25924876 Glycine max
Glyma.13G146300 1.0kb upstream 1.0kb upstream 1000 false Chr13: 25923877-25924876 Glycine max
Glyma.13G146300 1.0kb downstream 1.0kb downstream 2988 true Chr13: 25920889-25923876 Glycine max
Glyma.13G146300 1.0kb downstream 1.0kb downstream 1000 false Chr13: 25920889-25921888 Glycine max
Glyma.13G146300 2.0kb upstream 2.0kb upstream 3988 true Chr13: 25921889-25925876 Glycine max
Glyma.13G146300 2.0kb upstream 2.0kb upstream 2000 false Chr13: 25923877-25925876 Glycine max
Glyma.13G146300 2.0kb downstream 2.0kb downstream 3988 true Chr13: 25919889-25923876 Glycine max
Glyma.13G146300 2.0kb downstream 2.0kb downstream 2000 false Chr13: 25919889-25921888 Glycine max
Glyma.13G146300 5.0kb upstream 5.0kb upstream 6988 true Chr13: 25921889-25928876 Glycine max
Glyma.13G146300 5.0kb upstream 5.0kb upstream 5000 false Chr13: 25923877-25928876 Glycine max
Glyma.13G146300 5.0kb downstream 5.0kb downstream 6988 true Chr13: 25916889-25923876 Glycine max
Glyma.13G146300 5.0kb downstream 5.0kb downstream 5000 false Chr13: 25916889-25921888 Glycine max
Glyma.13G146300 10.0kb upstream 10.0kb upstream 11988 true Chr13: 25921889-25933876 Glycine max
Glyma.13G146300 10.0kb upstream 10.0kb upstream 10000 false Chr13: 25923877-25933876 Glycine max
Glyma.13G146300 10.0kb downstream 10.0kb downstream 11988 true Chr13: 25911889-25923876 Glycine max
Glyma.13G146300 10.0kb downstream 10.0kb downstream 10000 false Chr13: 25911889-25921888 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121618056 5273 Angiosperm View MSA
122254847 5265 Fabidae View MSA
123996826 5270 Rosid View MSA
123571230 5271 Pentapetalae View MSA
122605958 5272 Eudicot View MSA
120890177 5274 Embryophyte View MSA
122930853 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.7483 0.0 32.9818    
cufflinks 11.6912 0.0 32.9872    
cufflinks 3.7467 0.0 12.3843   Low
cufflinks 5.19226 0.0 16.3046   Low
cufflinks 14.8098 0.0 40.5711    
cufflinks 30.9463 0.0 82.5621 High High
cufflinks 5.9882 0.0 18.2236    
cufflinks 9.71449 0.0 27.9666    
cufflinks 14.2861 0.0 39.3965    
cufflinks 2.865        
cufflinks 1.115       Low
cufflinks 1.984        
cufflinks 6.792       High
cufflinks 5.076       High
cufflinks 0.726       Low
cufflinks 4.697       High
cufflinks 1.813        
cufflinks 2.348        
cufflinks 4.087        
cufflinks 3.073        
cufflinks 1.697        
cufflinks 3.96        
cufflinks 2.821        
cufflinks 1.298       Low
cufflinks 2.643        
cufflinks 2.551        

0 Strain