Gene : Glyma.13G146800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10093 - IRON-SULFUR CLUSTER ASSEMBLY ENZYME NIFU HOMOLOG Genomic Order:  1468
Name:  ? Glyma.13G146800 Secondary Identifier:  ? PAC:30503620
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G146800 0.5kb upstream 0.5kb upstream 3297 true Chr13: 25986003-25989299 Glycine max
Glyma.13G146800 0.5kb upstream 0.5kb upstream 500 false Chr13: 25986003-25986502 Glycine max
Glyma.13G146800 0.5kb downstream 0.5kb downstream 3297 true Chr13: 25986503-25989799 Glycine max
Glyma.13G146800 0.5kb downstream 0.5kb downstream 500 false Chr13: 25989300-25989799 Glycine max
Glyma.13G146800 1.0kb upstream 1.0kb upstream 3797 true Chr13: 25985503-25989299 Glycine max
Glyma.13G146800 1.0kb upstream 1.0kb upstream 1000 false Chr13: 25985503-25986502 Glycine max
Glyma.13G146800 1.0kb downstream 1.0kb downstream 3797 true Chr13: 25986503-25990299 Glycine max
Glyma.13G146800 1.0kb downstream 1.0kb downstream 1000 false Chr13: 25989300-25990299 Glycine max
Glyma.13G146800 2.0kb upstream 2.0kb upstream 4797 true Chr13: 25984503-25989299 Glycine max
Glyma.13G146800 2.0kb upstream 2.0kb upstream 2000 false Chr13: 25984503-25986502 Glycine max
Glyma.13G146800 2.0kb downstream 2.0kb downstream 4797 true Chr13: 25986503-25991299 Glycine max
Glyma.13G146800 2.0kb downstream 2.0kb downstream 2000 false Chr13: 25989300-25991299 Glycine max
Glyma.13G146800 5.0kb upstream 5.0kb upstream 7797 true Chr13: 25981503-25989299 Glycine max
Glyma.13G146800 5.0kb upstream 5.0kb upstream 5000 false Chr13: 25981503-25986502 Glycine max
Glyma.13G146800 5.0kb downstream 5.0kb downstream 7797 true Chr13: 25986503-25994299 Glycine max
Glyma.13G146800 5.0kb downstream 5.0kb downstream 5000 false Chr13: 25989300-25994299 Glycine max
Glyma.13G146800 10.0kb upstream 10.0kb upstream 12797 true Chr13: 25976503-25989299 Glycine max
Glyma.13G146800 10.0kb upstream 10.0kb upstream 10000 false Chr13: 25976503-25986502 Glycine max
Glyma.13G146800 10.0kb downstream 10.0kb downstream 12797 true Chr13: 25986503-25999299 Glycine max
Glyma.13G146800 10.0kb downstream 10.0kb downstream 10000 false Chr13: 25989300-25999299 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026522 5273 Angiosperm View MSA
122314473 5265 Fabidae View MSA
124069204 5270 Rosid View MSA
123746526 5271 Pentapetalae View MSA
122790333 5272 Eudicot View MSA
121348454 5274 Embryophyte View MSA
123428131 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 33.0958 0.0 135.313 High High
cufflinks 11.6376 0.0 38.9368   Low
cufflinks 32.6438 0.0 134.294 High High
cufflinks 15.8426 0.0 63.8102    
cufflinks 14.0258 0.0 57.0334    
cufflinks 27.4089 0.0 111.707 High  
cufflinks 12.8044 0.0 53.5254    
cufflinks 18.1865 0.0 76.3332    
cufflinks 13.2431 0.0 60.5249    
cufflinks 1.151        
cufflinks 1.82        
cufflinks 3.001       High
cufflinks 1.717        
cufflinks 1.222        
cufflinks 0.637       Low
cufflinks 1.436        
cufflinks 2.253        
cufflinks 1.784        
cufflinks 1.559        
cufflinks 1.293        
cufflinks 2.698       High
cufflinks 1.634        
cufflinks 1.664        
cufflinks 3.47       High
cufflinks 1.481        
cufflinks 3.42       High

0 Strain